Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   J7D36_RS02125 Genome accession   NZ_CP073060
Coordinates   443656..445701 (-) Length   681 a.a.
NCBI ID   WP_021510123.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain DETAB-P39     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 438656..450701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7D36_RS02090 (J7D36_02090) - 439141..439821 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  J7D36_RS02095 (J7D36_02095) - 439848..440489 (+) 642 WP_001093907.1 phospholipid-binding protein MlaC -
  J7D36_RS02100 (J7D36_02100) - 440501..440788 (+) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  J7D36_RS02105 (J7D36_02105) - 440857..441870 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  J7D36_RS02110 (J7D36_02110) - 442028..442609 (+) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  J7D36_RS02115 (J7D36_02115) - 442624..443025 (+) 402 WP_000849701.1 NUDIX hydrolase -
  J7D36_RS02120 (J7D36_02120) comF 443028..443663 (-) 636 WP_000472266.1 ComF family protein Machinery gene
  J7D36_RS02125 (J7D36_02125) recG 443656..445701 (-) 2046 WP_021510123.1 ATP-dependent DNA helicase RecG Machinery gene
  J7D36_RS02130 (J7D36_02130) - 445722..446537 (+) 816 WP_000547774.1 NAD-dependent epimerase/dehydratase family protein -
  J7D36_RS02135 (J7D36_02135) adeT2 446617..447603 (+) 987 WP_021510122.1 putative multidrug efflux protein AdeT2 -
  J7D36_RS02140 (J7D36_02140) plsB 447647..450220 (-) 2574 WP_002068823.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76434.07 Da        Isoelectric Point: 8.1887

>NTDB_id=486310 J7D36_RS02125 WP_021510123.1 443656..445701(-) (recG) [Acinetobacter baumannii strain DETAB-P39]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRRKEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=486310 J7D36_RS02125 WP_021510123.1 443656..445701(-) (recG) [Acinetobacter baumannii strain DETAB-P39]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTAGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACAC
CACTACCAAAAACGCAGCTCACTGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCACGAGCCGCCAGTTGATGCCAATATGATCCAACTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGTCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAGCTGCTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCACGCATTGGAAGCAGATTGGCAAGTTGCTTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATCGTGGGCACCCATGCCTTATTTCAAG
ATAACGTTGAGTTTGCAAAACTAGGACTGGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAGCGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCGATTATTGATGAATTACCCCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTAAAGAAGTACTGCATCGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTCGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TGCTAATTGCCACAACTGTTATTGAGGTTGGAGTAGACGTACCCAATGCGTCAATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGCGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAATTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATACGCATATGTTTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

RecG wedge domain (RecG_wedge)

(7-163)

DEAD/DEAH box helicase (DEAD)

(262-422)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389