Detailed information NTG0485835

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: KBP48_RS09355
• Genome accession: NZ_CP072932
• Coordinates: 2069076..2070221 (+)
• Length: 381 a.a.
• NCBI ID: WP_004086451.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain BB08-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2064076..2075221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KBP48_RS09335 (KBP48_09335)	rsmB	2064859..2066154 (-)	1296	WP_071869630.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
KBP48_RS09340 (KBP48_09340)	fmt	2066151..2067074 (-)	924	WP_038229920.1	methionyl-tRNA formyltransferase	-
KBP48_RS09345 (KBP48_09345)	def	2067180..2067692 (-)	513	WP_004089639.1	peptide deformylase	-
KBP48_RS09350 (KBP48_09350)	-	2067831..2068985 (+)	1155	WP_058564761.1	LysM peptidoglycan-binding domain-containing protein	-
KBP48_RS09355 (KBP48_09355)	dprA	2069076..2070221 (+)	1146	WP_004086451.1	DNA-processing protein DprA	Machinery gene
KBP48_RS09360 (KBP48_09360)	-	2070267..2070740 (+)	474	WP_004089636.1	DUF494 family protein	-
KBP48_RS09365 (KBP48_09365)	-	2071712..2074159 (+)	2448	WP_004086454.1	DNA topoisomerase I	-
KBP48_RS09370 (KBP48_09370)	-	2074273..2074836 (+)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40325.16 Da
• Isoelectric Point: 8.7008

>NTDB_id=485835 KBP48_RS09355 WP_004086451.1 2069076..2070221(+) (dprA) [Xylella fastidiosa subsp. multiplex strain BB08-1]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIGRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=485835 KBP48_RS09355 WP_004086451.1 2069076..2070221(+) (dprA) [Xylella fastidiosa subsp. multiplex strain BB08-1]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCT
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCGCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTGCCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCCAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTGAT
TGGCCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362