Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IEE84_RS11100 Genome accession   NZ_CP061739
Coordinates   2648037..2648414 (-) Length   125 a.a.
NCBI ID   WP_057761576.1    Uniprot ID   A0A7U6KS11
Organism   Psychrobacter sp. 28M-43     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2643037..2653414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IEE84_RS11080 (IEE84_11080) - 2644329..2645186 (-) 858 WP_191114209.1 CheR family methyltransferase -
  IEE84_RS11085 (IEE84_11085) - 2645371..2646657 (-) 1287 Protein_2184 methyl-accepting chemotaxis protein -
  IEE84_RS11090 (IEE84_11090) - 2646961..2647491 (-) 531 WP_160022438.1 chemotaxis protein CheW -
  IEE84_RS11095 (IEE84_11095) - 2647495..2647857 (-) 363 WP_057761573.1 response regulator -
  IEE84_RS11100 (IEE84_11100) pilG 2648037..2648414 (-) 378 WP_057761576.1 twitching motility response regulator PilG Regulator
  IEE84_RS11105 (IEE84_11105) - 2649103..2650332 (+) 1230 WP_191114210.1 efflux RND transporter periplasmic adaptor subunit -
  IEE84_RS11110 (IEE84_11110) - 2650591..2651313 (+) 723 WP_057761578.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14054.13 Da        Isoelectric Point: 4.5807

>NTDB_id=484431 IEE84_RS11100 WP_057761576.1 2648037..2648414(-) (pilG) [Psychrobacter sp. 28M-43]
MENNFEGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
NKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFDAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=484431 IEE84_RS11100 WP_057761576.1 2648037..2648414(-) (pilG) [Psychrobacter sp. 28M-43]
ATGGAAAATAATTTTGAAGGTTTAAAAGTAATGGTAATTGATGATTCAAAAACCATTCGCCGTACTGCAGAAACTTTATT
ACAAAAAGCGGGCTGTGAAGTAGTGACCGCTATCGATGGTTTTGATGCGTTAGCAAAGATTGTAGATAACAATCCAGATA
TTATTTTTGTCGACATTATGATGCCACGTCTAGATGGATATCAGACTTGTGCGCTGATAAAAAATAACCCTGATTATGCC
AATAAACCGGTAATCATGTTGTCATCTAAAGATGGTCTATTTGATAAGGCACGTGGTCGTATTGTGGGTTCTGATGAGTA
TCTGACCAAACCATTTAGTAAAGATGAGCTTTTTGATGCCATTAATCAGTACCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U6KS11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.226

99.2

0.776
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376
  vicR Streptococcus mutans UA159

40.517

92.8

0.376