Detailed information NTG0483925

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: IC772_RS04780
• Genome accession: NZ_CP061664
• Coordinates: 1016213..1018645 (+)
• Length: 810 a.a.
• NCBI ID: WP_191016804.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS28
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1015443..1023319	1016213..1018645	within	0

Gene organization within MGE regions

Location: 1015443..1023319

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC772_RS04775 (IC772_04775)	lolD	1015443..1016129 (+)	687	WP_004699850.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
IC772_RS04780 (IC772_04780)	comA/comEC	1016213..1018645 (+)	2433	WP_191016804.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
IC772_RS04785 (IC772_04785)	-	1018598..1019581 (-)	984	WP_191016806.1	lysophospholipid acyltransferase family protein	-
IC772_RS04790 (IC772_04790)	sppA	1019714..1020730 (+)	1017	WP_191016807.1	signal peptide peptidase SppA	-
IC772_RS04795 (IC772_04795)	-	1020750..1021559 (+)	810	WP_191016809.1	alpha/beta fold hydrolase	-
IC772_RS04800 (IC772_04800)	purN	1021623..1022252 (-)	630	WP_077169608.1	phosphoribosylglycinamide formyltransferase	-
IC772_RS04805 (IC772_04805)	purM	1022249..1023319 (-)	1071	WP_000071984.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92145.53 Da
• Isoelectric Point: 9.2525

>NTDB_id=483925 IC772_RS04780 WP_191016804.1 1016213..1018645(+) (comA/comEC) [Acinetobacter seifertii strain AS28]
MFKIILLGWIGGIALMGIHLPLIMQYGKVAKVLLLLAFIFYLFRRSVFVGRPLLKAIYCLLCTTSLFIVGYQYAENAVIE
RLQQSETDLKNVDIIVYIKKLSEEKNNKVQQTAQVLNLSKEPVNWLLYLKNDNQDGLKSNQRLELGHYYRLSGKTKPAHS
YATTGAFDQEKWFIQRNIMSGFTVQHIEPLSLDEIYRLGYQQHLRGQQSFFNRFHLNIEKLRLTFRYLLHNSSLQQKGLL
LALLTGDESLLSDETQLQFKQLGIAHLLAISGPHVLIFAIMLSWVCHQLICRYYPQIYLWKPKQVLLAVPCCLGVLIYTA
FVGFEIPALRTLLSVFIFISFLVLKQPLKPFALLVYSASLLLLMDPFSVLSAGFWLSYGACFILLRIYQTIVQLPEQHFL
SLSSKLIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIVAVPIVGGVIVPLNILAACAWFIVKPFGNMLFQFND
ILLSILLSCLSLLEKLSLPLQGISLTPLALFAVSLGILILFLPKGVFPKTWGVLCCLPLIVVNKTNQQIQLHILDVGQGQ
AIFLQHPEQNWLIDTGGSYDEKKFSIGQNVVVPFLRQQGVKQLDRVVLSHLDQDHSGAFPAIQQEIPVKQVLSNEQSSNT
LKQSFQYCHQGQHWQYPEVDIQVLWPKQKDLVFVSSQQNQYSCVVYLHFKGVSGYQNFLIMGDAGWEAEYELLKDYPSLK
VDVLILGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQEVINRLKALHIPLKSTVEQGTLSFVLESHKMVLHDRR
FERLWLRRAL

Nucleotide

• Length: 2433 bp

>NTDB_id=483925 IC772_RS04780 WP_191016804.1 1016213..1018645(+) (comA/comEC) [Acinetobacter seifertii strain AS28]
ATGTTTAAAATTATTCTATTGGGGTGGATTGGCGGTATTGCATTAATGGGTATTCATTTACCTTTAATCATGCAATATGG
AAAAGTAGCTAAGGTTTTACTTTTACTTGCCTTTATTTTTTATCTTTTTAGACGCTCAGTATTCGTTGGCCGACCACTTC
TAAAGGCTATTTATTGCCTGTTATGTACAACAAGTCTGTTTATTGTCGGGTATCAATATGCCGAGAATGCAGTGATCGAA
CGCTTACAACAAAGCGAAACGGATTTAAAGAATGTCGATATTATTGTTTATATAAAGAAACTTAGTGAAGAAAAAAATAA
TAAGGTCCAACAAACTGCACAAGTATTAAACTTATCAAAAGAACCAGTAAATTGGCTGTTGTATTTAAAAAATGATAATC
AGGATGGGTTGAAGAGCAATCAAAGACTTGAATTAGGCCATTACTATCGACTATCTGGAAAAACAAAACCTGCTCATAGT
TATGCCACAACAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATAATGTCTGGATTTACTGTTCAGCATAT
TGAACCTTTAAGCCTTGATGAGATCTATCGATTAGGATATCAACAGCATTTAAGAGGACAGCAGTCCTTTTTTAATAGAT
TTCATTTAAATATAGAAAAGCTTCGCTTAACTTTTAGGTATCTATTACACAATTCTTCATTACAGCAAAAGGGTCTACTT
TTAGCTTTGCTGACTGGTGATGAAAGTCTTTTATCAGATGAAACTCAACTACAATTTAAACAATTAGGAATTGCTCACTT
ATTGGCGATTTCAGGGCCACATGTACTTATTTTTGCAATCATGTTGTCTTGGGTGTGTCATCAACTCATTTGTCGTTATT
ACCCTCAAATTTATTTATGGAAACCCAAACAAGTTTTATTGGCTGTACCATGCTGCCTCGGGGTTTTAATTTATACAGCT
TTTGTTGGGTTTGAAATTCCTGCACTACGGACATTGTTGTCAGTCTTTATATTTATTTCTTTCCTAGTATTAAAACAACC
CCTTAAACCATTTGCATTACTTGTATATAGCGCCAGTCTACTGTTGCTAATGGATCCGTTTAGTGTCCTCTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTATCAAACTATAGTGCAGTTACCTGAGCAACATTTTTTA
AGCTTAAGCTCAAAACTGATTTTTATGAGTAAGGTGTTAATTGAGTCTCAAGGCAAAATATTTATTGCATTGAGTCCTTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGGTTGCTCCATTAACCAATATTGTTGCGGTGCCTATTGTTGGTGGTGTTA
TTGTCCCTTTAAATATTTTGGCTGCTTGTGCATGGTTTATCGTCAAACCATTCGGGAATATGCTATTTCAGTTTAATGAT
ATTTTACTGAGTATCTTACTAAGTTGCCTAAGCTTATTAGAAAAACTCTCTTTACCACTACAAGGTATAAGCTTGACGCC
ACTGGCTTTATTCGCAGTGAGTTTAGGTATCCTTATTTTATTTTTGCCTAAAGGCGTTTTCCCAAAAACATGGGGAGTAC
TCTGTTGTTTACCCCTAATTGTAGTGAATAAAACGAACCAGCAAATTCAGCTTCATATTTTAGATGTTGGACAGGGGCAG
GCTATTTTCTTACAACATCCTGAACAAAACTGGCTAATTGATACAGGTGGTTCTTACGATGAAAAGAAATTCAGTATCGG
TCAAAATGTTGTAGTCCCTTTTTTACGCCAACAAGGAGTTAAACAATTAGATCGTGTTGTATTGTCTCATCTTGACCAAG
ATCATAGTGGCGCTTTTCCAGCCATTCAGCAGGAGATTCCTGTAAAGCAGGTTCTCTCAAATGAGCAATCTTCAAATACT
CTCAAACAGTCATTTCAATATTGTCATCAAGGTCAACACTGGCAATATCCAGAGGTGGATATCCAAGTTTTATGGCCTAA
ACAAAAAGATTTAGTTTTTGTATCTTCTCAACAGAATCAATATTCCTGTGTGGTATATCTTCATTTCAAAGGAGTCAGTG
GTTACCAAAATTTTCTGATTATGGGAGATGCAGGCTGGGAAGCAGAGTACGAGCTGTTAAAAGACTATCCAAGCTTAAAA
GTAGATGTTTTGATATTGGGTCATCATGGAAGCAAGCACAGCTCTGCTTATGATTTCTTAGCAACTTTAAAACCAAAACT
GGCAATTGCATCAGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAAGAGGTTATCAATCGTTTAAAAGCCCTTCATA
TCCCACTTAAAAGTACAGTAGAGCAAGGAACGTTAAGTTTTGTTCTGGAAAGCCACAAAATGGTTTTACACGACCGACGT
TTTGAGCGGCTCTGGTTGCGTAGAGCTCTCTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-633)

• Competence protein (Competence) (243-521)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	85.538	99.877	0.854
comA/comEC	Acinetobacter baumannii strain A118	84.672	99.877	0.846
comA/comEC	Acinetobacter baylyi ADP1	50.185	99.877	0.501