Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IC776_RS14965 Genome accession   NZ_CP061646
Coordinates   3248170..3248553 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain AS39     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3243170..3253553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC776_RS14950 (IC776_14950) - 3245062..3247143 (-) 2082 WP_151761890.1 methyl-accepting chemotaxis protein -
  IC776_RS14955 (IC776_14955) - 3247190..3247726 (-) 537 WP_004705775.1 chemotaxis protein CheW -
  IC776_RS14960 (IC776_14960) - 3247784..3248146 (-) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC776_RS14965 (IC776_14965) pilG 3248170..3248553 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  IC776_RS14970 (IC776_14970) - 3248837..3249475 (+) 639 WP_191012114.1 hypothetical protein -
  IC776_RS14975 (IC776_14975) - 3249535..3250653 (+) 1119 WP_191012115.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=483819 IC776_RS14965 WP_000389061.1 3248170..3248553(-) (pilG) [Acinetobacter seifertii strain AS39]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=483819 IC776_RS14965 WP_000389061.1 3248170..3248553(-) (pilG) [Acinetobacter seifertii strain AS39]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGAGAAGGTTGTGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TCGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCAAGTAAAGATGGTCTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTAACGAAACCATTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37