Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IC780_RS16440 Genome accession   NZ_CP061629
Coordinates   3435637..3436020 (-) Length   127 a.a.
NCBI ID   WP_077168706.1    Uniprot ID   A0A7H2TVZ6
Organism   Acinetobacter seifertii strain AS47     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3430637..3441020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC780_RS16425 (IC780_16420) - 3432529..3434610 (-) 2082 WP_004705776.1 methyl-accepting chemotaxis protein -
  IC780_RS16430 (IC780_16425) - 3434657..3435193 (-) 537 WP_004705775.1 chemotaxis protein CheW -
  IC780_RS16435 (IC780_16430) - 3435251..3435613 (-) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC780_RS16440 (IC780_16435) pilG 3435637..3436020 (-) 384 WP_077168706.1 twitching motility response regulator PilG Regulator
  IC780_RS16445 (IC780_16440) - 3436304..3436942 (+) 639 WP_049064413.1 hypothetical protein -
  IC780_RS16450 (IC780_16445) - 3437002..3438120 (+) 1119 WP_077168707.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14214.26 Da        Isoelectric Point: 4.5865

>NTDB_id=483699 IC780_RS16440 WP_077168706.1 3435637..3436020(-) (pilG) [Acinetobacter seifertii strain AS47]
MEEAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=483699 IC780_RS16440 WP_077168706.1 3435637..3436020(-) (pilG) [Acinetobacter seifertii strain AS47]
ATGGAAGAAGCGTTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGAGAAGGTTGTGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TCGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCAAGTAAAGATGGTCTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCATTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H2TVZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37