Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   IC781_RS00990 Genome accession   NZ_CP061626
Coordinates   218438..219568 (-) Length   376 a.a.
NCBI ID   WP_004705926.1    Uniprot ID   N8SDA3
Organism   Acinetobacter seifertii strain AS48     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 213438..224568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC781_RS00965 (IC781_00965) - 213612..214376 (-) 765 WP_004705932.1 AraC family transcriptional regulator -
  IC781_RS00970 (IC781_00970) - 214397..215611 (-) 1215 WP_039252932.1 MFS transporter -
  IC781_RS00975 (IC781_00975) - 215748..216401 (+) 654 WP_077164355.1 TetR/AcrR family transcriptional regulator -
  IC781_RS00980 (IC781_00980) - 216508..217428 (+) 921 WP_004705929.1 DMT family transporter -
  IC781_RS00985 (IC781_00985) - 217818..218387 (-) 570 WP_004705928.1 L-threonylcarbamoyladenylate synthase -
  IC781_RS00990 (IC781_00990) dprA 218438..219568 (-) 1131 WP_004705926.1 DNA-processing protein DprA Machinery gene
  IC781_RS00995 (IC781_00995) tsaP 219589..220743 (-) 1155 WP_004705925.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  IC781_RS01000 (IC781_01000) def 220866..221396 (+) 531 WP_004705924.1 peptide deformylase -
  IC781_RS01005 (IC781_01005) - 221432..221857 (+) 426 WP_004705923.1 DUF2946 family protein -
  IC781_RS01010 (IC781_01010) - 221931..224045 (+) 2115 WP_004705922.1 TonB-dependent copper receptor -
  IC781_RS01015 (IC781_01015) - 224099..224305 (+) 207 WP_004705921.1 hypothetical protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41846.50 Da        Isoelectric Point: 6.4979

>NTDB_id=483627 IC781_RS00990 WP_004705926.1 218438..219568(-) (dprA) [Acinetobacter seifertii strain AS48]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGDCEKATQPDGLAKWQSLGLHANHLKRLNEFQTAQGQTEFERLIQQV
QQHTDFILTPDDAGYPTQLLPYTDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASVHQRTIAVIGTGLDSTYPAQNKKLAEHILAQNGAIISEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKIVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQNSTEEAIVSCTPEIP
EHLINIYQSLDWVGQNIDQLVLHHSQPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=483627 IC781_RS00990 WP_004705926.1 218438..219568(-) (dprA) [Acinetobacter seifertii strain AS48]
ATGCTTACCCAACTTTCTTCACACCATTACCACACACTTAAAGTGTGGTATTTGGTGCAACACTCGTTAGTTAGCTTTAA
AAAAATTATTGATTATTTTGGAGACTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGCAATCTCTTGGCTTAC
ATGCCAATCACTTAAAGCGTCTAAATGAGTTTCAAACGGCGCAAGGTCAAACCGAGTTTGAACGACTTATACAACAAGTT
CAACAGCATACTGATTTTATTTTGACACCAGATGATGCTGGCTATCCAACTCAATTACTCCCTTATACAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAAGCATTATTACAACCGCAAATTGCGATTGTCGGTAGCCGAAAACCTAGCCCAC
ATGGTCGTCAGGTGGCTTATGATTTTGCCTATTATTTAAGTGAAAAGGGTTTTTATGTAAGTAGCGGCTTGGCATACGGC
ATTGATGAAGCAGCTCATCAAGGTGCATCTGTTCATCAACGTACGATAGCAGTGATAGGTACAGGTTTAGACAGTACCTA
TCCAGCTCAAAATAAAAAATTGGCAGAACATATTCTGGCTCAGAACGGCGCCATCATTAGTGAGTTTTTACCGGGAACAC
CACCTCTACAGCAGCATTTTCCACGTAGAAACAGAATTGTTAGCGGTCTGAGTTTAGGCGTATTAGTTGTAGAAGCGACT
TTAAAAAGTGGCTCCCTCATTACTGCCAATAAAGCAGCTGAGCAAGGCAAAATCGTATTTGCCATTCCCGGTCATATTTA
CAGTGAATTTCATCAAGGTTGCCATCAACTTATTCGTGAAGGTGCAATTTTAGTCGATCACCCTGAACAAATTATTGAAG
ACCTCGCCCTACCCACCCAATGGCAGAGCCAACAAAACTCAACAGAGGAGGCAATCGTTTCTTGCACCCCAGAAATTCCA
GAGCATTTGATTAATATTTATCAGTCTTTAGACTGGGTAGGCCAAAATATTGACCAGCTTGTTTTGCATCATTCACAACC
TGTTTCTGAACTCACCTCATCATTGATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGATTGTATTTACGTT
GTCGTTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N8SDA3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

90.691

100

0.907

  dprA Acinetobacter baumannii D1279779

90.691

100

0.907

  dprA Acinetobacter baylyi ADP1

71.654

100

0.726