Detailed information NTG0483559

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC783_RS11410
• Genome accession: NZ_CP061613
• Coordinates: 2337566..2338381 (-)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS51
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2332566..2343381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC783_RS11380 (IC783_11380)	-	2332879..2333319 (-)	441	WP_107973453.1	SRPBCC family protein	-
IC783_RS11385 (IC783_11385)	tadA	2333389..2333891 (-)	503	Protein_2236	tRNA adenosine(34) deaminase TadA	-
IC783_RS11390 (IC783_11390)	-	2333899..2335023 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC783_RS11395 (IC783_11395)	ung	2335020..2335733 (-)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC783_RS11400 (IC783_11400)	-	2335784..2336380 (-)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC783_RS11405 (IC783_11405)	gspK	2336610..2337566 (-)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC783_RS11410 (IC783_11410)	xcpW	2337566..2338381 (-)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC783_RS11415 (IC783_11415)	xcpV	2338381..2338761 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC783_RS11420 (IC783_11420)	-	2338751..2339302 (-)	552	WP_004701984.1	type II secretion system protein	-
IC783_RS11425 (IC783_11425)	-	2339312..2339920 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC783_RS11430 (IC783_11430)	-	2339958..2340731 (-)	774	WP_077168509.1	TatD family hydrolase	-
IC783_RS11435 (IC783_11435)	-	2340749..2341090 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC783_RS11440 (IC783_11440)	-	2341103..2342083 (-)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC783_RS11445 (IC783_11445)	kdsB	2342095..2342856 (-)	762	WP_190980250.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483559 IC783_RS11410 WP_077168510.1 2337566..2338381(-) (xcpW) [Acinetobacter seifertii strain AS51]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483559 IC783_RS11410 WP_077168510.1 2337566..2338381(-) (xcpW) [Acinetobacter seifertii strain AS51]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79