Detailed information NTG0483438

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: IC788_RS04520
• Genome accession: NZ_CP061596
• Coordinates: 970918..973350 (+)
• Length: 810 a.a.
• NCBI ID: WP_191001243.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS59
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	970148..978024	970918..973350	within	0

Gene organization within MGE regions

Location: 970148..978024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC788_RS04515 (IC788_04515)	-	970148..970834 (+)	687	WP_191001242.1	ABC transporter ATP-binding protein	-
IC788_RS04520 (IC788_04520)	comA/comEC	970918..973350 (+)	2433	WP_191001243.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
IC788_RS04525 (IC788_04525)	-	973303..974286 (-)	984	WP_191001244.1	lysophospholipid acyltransferase family protein	-
IC788_RS04530 (IC788_04530)	sppA	974419..975435 (+)	1017	WP_019457289.1	signal peptide peptidase SppA	-
IC788_RS04535 (IC788_04535)	-	975455..976264 (+)	810	WP_191001245.1	alpha/beta fold hydrolase	-
IC788_RS04540 (IC788_04540)	purN	976328..976957 (-)	630	WP_002052470.1	phosphoribosylglycinamide formyltransferase	-
IC788_RS04545 (IC788_04545)	purM	976954..978024 (-)	1071	WP_191001246.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92359.48 Da
• Isoelectric Point: 8.4852

>NTDB_id=483438 IC788_RS04520 WP_191001243.1 970918..973350(+) (comA/comEC) [Acinetobacter seifertii strain AS59]
MFKIILLGWIGGIALMGIHLPLIMQYGEVAKVLLLLAFIFYLFKRSVFVGRPLLKAMYCLLCTTSLFIVGYQYAENALIE
RLQQRETDSKNLDIIVHIKQLSEEKDNKVQQTAQVLNLSKEPVNWLLYLKNDNQDGLKSNQELELGHYYRLSGKTKPAHS
YATTGAFDQEKWFIQRNIMSGFTVQHIEPLSLDEIYRLGYQQHLKEQQSFFNRFHLNIEKLRLTFRYLLHNSSLQQKGLL
LALLTGDESLLSDETQLQFKQLGIAHSLAISGPHVLIFAIMLSWICHQLICSYYPQIYLWKPKQVLLVVPFSFGVLIYTA
FVGFEIPALRTLLSVSIFISFLILKQPLKPFALLVYSASLLLLMDPFSVLSAGFWLSYGACFILLRIYQTIVQLPEQHFL
SLNSKLIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIVAVPIVGGVIVPLNILAACAWFIVKPFGNMLFQFND
ILLSILLTCLSLLEKLSLPIQGISLTPLALFAVSLGILILFLPKGVLPKTWGVLCCLPLIVMNKTNQQIQLHILDVGQGQ
AILLQQPEQNWLIDTGGSYDEKKFSIGQNVVVPFLRQQGVKQLDRVVLSHLDQDHSGAFPAIQQEIPVKQVLSNEQSSNT
LKQSFQYCHQDQQWQYPELDIQVLWPKEKDLAFVHSQQNQYSCVVYIYFKGVSGYQNFLIMGDAGWEAEYELLKDYPSLK
VDVLILGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQEVINRLKALHIPLKSTVEQGELSFVLENHKMVLHDRR
FERLWLRRAF

Nucleotide

• Length: 2433 bp

>NTDB_id=483438 IC788_RS04520 WP_191001243.1 970918..973350(+) (comA/comEC) [Acinetobacter seifertii strain AS59]
ATGTTTAAAATTATTCTATTGGGGTGGATTGGCGGTATTGCATTAATGGGTATTCATTTACCTTTAATCATGCAATATGG
AGAAGTAGCTAAAGTTCTACTTTTACTTGCCTTTATTTTTTATCTTTTTAAACGATCAGTATTTGTTGGTCGACCACTTC
TAAAGGCTATGTATTGCCTGCTATGTACAACAAGTCTGTTTATTGTCGGGTATCAATATGCCGAGAATGCACTGATCGAA
CGCTTACAACAAAGAGAAACAGATTCAAAGAATCTCGATATTATTGTTCATATAAAGCAACTCAGTGAAGAAAAAGACAA
TAAAGTTCAACAAACTGCACAAGTATTAAACTTATCAAAAGAACCAGTAAATTGGCTGTTGTATTTAAAAAATGATAATC
AGGATGGGTTGAAGAGCAATCAAGAACTTGAATTAGGCCATTACTATCGACTATCTGGAAAAACAAAACCTGCTCATAGT
TATGCCACAACAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATAATGTCTGGATTTACTGTTCAGCATAT
TGAACCTTTAAGCCTTGATGAGATCTATCGATTAGGATATCAACAGCATTTGAAAGAGCAGCAGTCCTTTTTTAATAGAT
TTCATTTAAATATAGAAAAGCTTCGCTTAACTTTTAGGTATCTATTACACAATTCTTCATTACAGCAAAAGGGCCTACTT
TTAGCTTTACTGACTGGTGATGAAAGCCTTTTATCAGATGAAACTCAACTACAGTTTAAACAATTAGGAATTGCTCACTC
ATTGGCGATTTCGGGTCCACATGTACTTATTTTTGCCATTATGTTGTCTTGGATTTGTCATCAACTCATCTGCAGTTATT
ATCCTCAAATTTATTTATGGAAACCCAAACAAGTTTTATTGGTTGTACCATTTAGTTTCGGGGTTTTAATTTATACAGCT
TTTGTTGGGTTTGAAATTCCCGCTCTACGGACATTGTTATCAGTCTCTATATTTATTTCCTTCCTAATATTAAAACAACC
CCTTAAACCATTTGCATTACTGGTATATAGCGCAAGTCTATTGTTGCTAATGGACCCGTTTAGTGTCCTTTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTATCAAACTATAGTGCAGTTACCTGAGCAACATTTTTTA
AGTCTGAATTCAAAACTGATTTTTATGAGTAAGGTGTTAATTGAGTCTCAGGGCAAAATATTTATTGCATTGAGTCCTTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGGTTGCTCCATTAACCAATATTGTTGCGGTGCCTATTGTTGGTGGTGTTA
TTGTCCCTTTAAATATTTTGGCTGCTTGTGCATGGTTTATCGTCAAACCATTCGGGAATATGCTATTTCAGTTTAATGAT
ATTTTACTGAGTATCTTGCTAACTTGCTTAAGCTTATTAGAAAAACTCTCTTTACCAATACAAGGTATAAGCTTGACGCC
ACTGGCTTTATTCGCAGTGAGTTTAGGTATTCTTATTTTATTTTTACCTAAAGGTGTTTTGCCAAAAACATGGGGGGTAC
TCTGTTGTTTACCCCTAATTGTAATGAACAAAACGAACCAGCAAATTCAGCTTCATATTTTAGATGTTGGGCAGGGGCAA
GCTATTTTGTTGCAGCAGCCTGAACAAAACTGGCTAATTGATACAGGTGGTTCTTACGATGAAAAAAAATTCAGTATCGG
TCAAAATGTTGTAGTCCCATTTTTACGCCAACAAGGTGTAAAACAATTAGATCGTGTCGTGCTCTCTCATCTTGACCAAG
ATCATAGTGGCGCTTTTCCTGCCATTCAGCAGGAGATTCCTGTAAAACAGGTTCTCTCAAATGAGCAATCTTCAAATACT
CTCAAGCAGTCATTTCAATATTGCCATCAAGATCAACAATGGCAATATCCAGAGTTAGATATTCAAGTTTTATGGCCTAA
AGAAAAAGATTTAGCTTTTGTTCATTCTCAACAGAACCAATATTCTTGCGTTGTATATATCTACTTTAAAGGAGTCAGTG
GTTACCAAAATTTTCTGATTATGGGAGATGCAGGATGGGAAGCTGAATACGAGTTGTTAAAAGATTATCCAAGCTTAAAA
GTAGATGTTTTGATATTGGGTCATCATGGAAGCAAGCACAGCTCTGCTTATGATTTCTTAGCAACTTTAAAACCAAAACT
GGCAATTGCATCAGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAAGAGGTTATCAATCGTTTAAAAGCCCTTCATA
TCCCACTTAAAAGTACAGTAGAGCAAGGGGAGTTAAGTTTTGTTCTGGAGAATCACAAGATGGTTTTACACGACCGACGT
TTTGAGCGGCTCTGGTTGCGTAGAGCTTTCTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (243-521)

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-634)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	85.309	100	0.853
comA/comEC	Acinetobacter baumannii strain A118	84.444	100	0.844
comA/comEC	Acinetobacter baylyi ADP1	50.309	99.877	0.502