Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IC788_RS03310 Genome accession   NZ_CP061596
Coordinates   676385..676768 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain AS59     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 671385..681768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC788_RS03300 (IC788_03300) - 674286..675404 (-) 1119 WP_191001153.1 efflux RND transporter periplasmic adaptor subunit -
  IC788_RS03305 (IC788_03305) - 675464..676102 (-) 639 WP_191001154.1 hypothetical protein -
  IC788_RS03310 (IC788_03310) pilG 676385..676768 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  IC788_RS03315 (IC788_03315) - 676792..677154 (+) 363 WP_004705774.1 PleD family two-component system response regulator -
  IC788_RS03320 (IC788_03320) - 677212..677749 (+) 538 Protein_638 chemotaxis protein CheW -
  IC788_RS03325 (IC788_03325) - 677796..679877 (+) 2082 WP_134263163.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=483436 IC788_RS03310 WP_000389061.1 676385..676768(+) (pilG) [Acinetobacter seifertii strain AS59]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=483436 IC788_RS03310 WP_000389061.1 676385..676768(+) (pilG) [Acinetobacter seifertii strain AS59]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACAGCAGAAACATTATT
GCAACGAGAAGGTTGTGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTCTGATTAAGAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCAAGTAAAGATGGTCTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCATTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37