Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   IC793_RS17985 Genome accession   NZ_CP061571
Coordinates   3696389..3697519 (+) Length   376 a.a.
NCBI ID   WP_191102379.1    Uniprot ID   -
Organism   Acinetobacter seifertii strain AS70     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3691389..3702519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IC793_RS17960 (IC793_17950) - 3691668..3691874 (-) 207 WP_039252952.1 hypothetical protein -
  IC793_RS17965 (IC793_17955) - 3691928..3694027 (-) 2100 WP_191102378.1 TonB-dependent copper receptor -
  IC793_RS17970 (IC793_17960) - 3694101..3694526 (-) 426 WP_004705923.1 DUF2946 family protein -
  IC793_RS17975 (IC793_17965) def 3694562..3695092 (-) 531 WP_004705924.1 peptide deformylase -
  IC793_RS17980 (IC793_17970) - 3695215..3696368 (+) 1154 Protein_3545 LysM peptidoglycan-binding domain-containing protein -
  IC793_RS17985 (IC793_17975) dprA 3696389..3697519 (+) 1131 WP_191102379.1 DNA-processing protein DprA Machinery gene
  IC793_RS17990 (IC793_17980) - 3697570..3698139 (+) 570 WP_191102380.1 L-threonylcarbamoyladenylate synthase -
  IC793_RS17995 (IC793_17985) - 3698529..3699449 (-) 921 WP_151741281.1 DMT family transporter -
  IC793_RS18000 (IC793_17990) - 3699556..3700209 (-) 654 WP_151741280.1 TetR/AcrR family transcriptional regulator -
  IC793_RS18005 (IC793_17995) - 3700345..3701559 (+) 1215 WP_191102381.1 MFS transporter -
  IC793_RS18010 (IC793_18000) - 3701580..3702344 (+) 765 WP_191102382.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41910.63 Da        Isoelectric Point: 6.6168

>NTDB_id=483299 IC793_RS17985 WP_191102379.1 3696389..3697519(+) (dprA) [Acinetobacter seifertii strain AS70]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGDCEKATQPDGLAKWQSLGLHANHLKRLNEFQTAQGQTEFERLIQQV
QQHTDFILTPDDVGYPTQLLPYIDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IHEAAHQGASVHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIISEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKIVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQNSTEEAIVSCTPEIP
EHLINLYQSLDWVGQNIDQLILHHSQPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=483299 IC793_RS17985 WP_191102379.1 3696389..3697519(+) (dprA) [Acinetobacter seifertii strain AS70]
ATGCTTACCCAACTTTCTTCACACCATTACCACACACTTAAAGTGTGGTATTTGGTGCAACACTCATTAGTTAGCTTCAA
AAAAATTATTGATTATTTTGGAGACTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGCAATCTCTTGGCTTAC
ATGCTAATCACTTAAAGCGTCTAAACGAGTTTCAAACGGCGCAAGGTCAAACTGAGTTTGAACGACTTATACAACAAGTT
CAGCAGCATACTGATTTTATTTTGACACCAGATGATGTTGGTTATCCAACTCAATTACTCCCTTATATAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAAGCATTATTACAACCGCAAATTGCGATTGTCGGTAGCCGAAAACCTAGCCCAC
ATGGTCGTCAGGTGGCTTATGATTTTGCCTATTATTTAAGTGAAAAAGGTTTTTATGTAAGTAGCGGCTTGGCATATGGC
ATTCATGAAGCAGCTCATCAAGGTGCATCTGTTCATCAACGTACGATAGCAGTGACAGGTACAGGTTTAGACAGTACCTA
TCCAGCTCAAAATAAAAAATTGGCAGAACATATTCTGGCTCAGAACGGCGCCATCATTAGTGAGTTTTTACCAGGAACAC
CACCACTACAGCAGCATTTTCCGCGTAGAAACCGAATTGTTAGCGGTCTGAGTTTAGGCGTATTAGTTGTAGAAGCGACT
TTAAAAAGTGGCTCCCTCATTACTGCCAATAAAGCAGCTGAGCAAGGCAAAATCGTATTTGCCATTCCCGGTCATATTTA
CAGTGAATTTCATCAAGGTTGCCATCAACTTATTCGTGAAGGTGCAATTTTAGTCGATCACCCTGAACAAATTATTGAAG
ACCTCGCCCTACCCACCCAATGGCAGAGCCAACAAAACTCAACAGAGGAGGCAATCGTTTCTTGCACCCCAGAAATTCCA
GAGCATTTGATTAATCTTTATCAGTCTTTAGACTGGGTAGGCCAAAATATTGACCAGCTTATTTTGCATCATTCACAACC
TGTTTCTGAACTCACCTCATCATTGATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGATTGTATTTACGTT
GTCGTTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

90.426

100

0.904

  dprA Acinetobacter baumannii D1279779

90.426

100

0.904

  dprA Acinetobacter baylyi ADP1

71.654

100

0.726