Detailed information NTG0482897

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: J7T60_RS06680
• Genome accession: NZ_CP072436
• Coordinates: 1276594..1277520 (-)
• Length: 308 a.a.
• NCBI ID: WP_271295774.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24735
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1271594..1282520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T60_RS06650 (J7T60_06595)	-	1271672..1272466 (-)	795	WP_372433408.1	HAD-IIB family hydrolase	-
J7T60_RS06655 (J7T60_06600)	-	1272650..1273027 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
J7T60_RS06660 (J7T60_06605)	-	1273032..1273730 (+)	699	WP_372433409.1	ABC transporter ATP-binding protein	-
J7T60_RS06665 (J7T60_06610)	-	1273742..1274527 (+)	786	WP_011681414.1	hypothetical protein	-
J7T60_RS06670 (J7T60_06615)	-	1274577..1275506 (-)	930	WP_011681415.1	ATP-binding cassette domain-containing protein	-
J7T60_RS06675 (J7T60_06620)	amiE	1275499..1276584 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
J7T60_RS06680 (J7T60_06625)	amiD	1276594..1277520 (-)	927	WP_271295774.1	oligopeptide ABC transporter permease OppC	Regulator
J7T60_RS06685 (J7T60_06630)	amiC	1277520..1279013 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
J7T60_RS06690 (J7T60_06635)	amiA3	1279074..1281044 (-)	1971	WP_372433410.1	peptide ABC transporter substrate-binding protein	Regulator
J7T60_RS06695 (J7T60_06640)	-	1281280..1281470 (-)	191	Protein_1264	IS3 family transposase	-
J7T60_RS06700	-	1281464..1281874 (-)	411	Protein_1265	ATP-binding cassette domain-containing protein	-
J7T60_RS06705 (J7T60_06655)	-	1281906..1282220 (-)	315	Protein_1266	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34708.88 Da
• Isoelectric Point: 9.7054

>NTDB_id=482897 J7T60_RS06680 WP_271295774.1 1276594..1277520(-) (amiD) [Streptococcus thermophilus strain S24735]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAIWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=482897 J7T60_RS06680 WP_271295774.1 1276594..1277520(-) (amiD) [Streptococcus thermophilus strain S24735]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTACTATTA
TTTTAATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTATTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATCGGTATTGCCTATAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.675	100	0.997
amiD	Streptococcus thermophilus LMD-9	99.675	100	0.997
amiD	Streptococcus salivarius strain HSISS4	96.104	100	0.961