Detailed information
Bioinformatically predicted
Overview
| Name | htrA | Type | Regulator |
| Locus tag | IDM39_RS11320 | Genome accession | NZ_CP061509 |
| Coordinates | 2195979..2197241 (-) | Length | 420 a.a. |
| NCBI ID | WP_029237456.1 | Uniprot ID | A0A1X4JLK3 |
| Organism | Weissella cibaria strain NH9449 | ||
| Function | repress competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2190979..2202241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IDM39_RS11300 (IDM39_11245) | rpoE | 2192190..2192777 (-) | 588 | WP_063084196.1 | DNA-directed RNA polymerase subunit delta | - |
| IDM39_RS11305 (IDM39_11250) | yidA | 2192858..2193694 (-) | 837 | WP_043708567.1 | sugar-phosphatase | - |
| IDM39_RS11310 (IDM39_11255) | - | 2193740..2195098 (-) | 1359 | WP_247224353.1 | HD domain-containing protein | - |
| IDM39_RS11315 (IDM39_11260) | - | 2195204..2195641 (+) | 438 | WP_010372059.1 | DUF1934 domain-containing protein | - |
| IDM39_RS11320 (IDM39_11265) | htrA | 2195979..2197241 (-) | 1263 | WP_029237456.1 | trypsin-like peptidase domain-containing protein | Regulator |
| IDM39_RS11325 (IDM39_11270) | - | 2197356..2198156 (-) | 801 | WP_247224354.1 | MBL fold metallo-hydrolase | - |
| IDM39_RS11330 (IDM39_11275) | yycI | 2198258..2199070 (-) | 813 | WP_118123258.1 | two-component system regulatory protein YycI | - |
| IDM39_RS11335 (IDM39_11280) | yycH | 2199070..2200395 (-) | 1326 | WP_247224360.1 | two-component system activity regulator YycH | - |
Sequence
Protein
Download Length: 420 a.a. Molecular weight: 42751.56 Da Isoelectric Point: 4.9746
>NTDB_id=482633 IDM39_RS11320 WP_029237456.1 2195979..2197241(-) (htrA) [Weissella cibaria strain NH9449]
MKKTSTTKIAIIGIVAGLVGGGAAAGGVTYLNNAGTFSTVTTGKTTPVKVSNSNVKGESDATKAFNKVSGAVVSVINLQK
QQSLSDSGSLFGGLFGGDESSSSDSKSTDSSDLQTASEGSGVVYKKDGNTAYIVTNNHVVSGSNALQVLLSDGTKLTATL
VGTDEQTDLAVLKINASKVSEVADFANSSKIEPGQSVLAIGSPLGSEYATSVTEGIISATKREVDATNENGDSLGKATVI
QTDAAINPGNSGGPLVNLAGQVVGINSMKLASSTDGTSVEGMGFAIPANTVVNIINELEKNGKVERPALGVSMVDLSNVS
TTDQSTILKLPTSVSGGVVVISTEDGSAAATAGLKKYDVITKIDDTEVTGSGDLRDALYKHKVGDTIKVTYYRDGKQKTT
DVKLTKTTSSLSTKSEANQN
MKKTSTTKIAIIGIVAGLVGGGAAAGGVTYLNNAGTFSTVTTGKTTPVKVSNSNVKGESDATKAFNKVSGAVVSVINLQK
QQSLSDSGSLFGGLFGGDESSSSDSKSTDSSDLQTASEGSGVVYKKDGNTAYIVTNNHVVSGSNALQVLLSDGTKLTATL
VGTDEQTDLAVLKINASKVSEVADFANSSKIEPGQSVLAIGSPLGSEYATSVTEGIISATKREVDATNENGDSLGKATVI
QTDAAINPGNSGGPLVNLAGQVVGINSMKLASSTDGTSVEGMGFAIPANTVVNIINELEKNGKVERPALGVSMVDLSNVS
TTDQSTILKLPTSVSGGVVVISTEDGSAAATAGLKKYDVITKIDDTEVTGSGDLRDALYKHKVGDTIKVTYYRDGKQKTT
DVKLTKTTSSLSTKSEANQN
Nucleotide
Download Length: 1263 bp
>NTDB_id=482633 IDM39_RS11320 WP_029237456.1 2195979..2197241(-) (htrA) [Weissella cibaria strain NH9449]
ATGAAAAAGACATCAACCACAAAAATAGCAATTATCGGAATTGTTGCCGGGCTAGTCGGCGGTGGTGCCGCTGCTGGTGG
CGTAACTTACCTGAATAATGCCGGCACTTTTTCAACAGTCACGACTGGTAAGACGACACCGGTAAAGGTAAGTAACTCGA
ACGTGAAGGGCGAATCTGATGCAACGAAGGCCTTTAACAAGGTGTCGGGCGCAGTTGTGTCAGTGATTAACTTGCAAAAG
CAACAGTCACTTTCAGACAGTGGCTCATTATTTGGTGGGTTGTTTGGTGGTGATGAGTCATCGTCAAGTGATAGCAAGTC
AACGGATTCATCAGACCTTCAAACGGCTTCTGAGGGATCAGGAGTGGTTTACAAGAAGGATGGTAACACGGCTTATATCG
TCACGAACAACCACGTGGTTTCAGGGTCAAACGCGTTGCAAGTCTTGTTGAGCGATGGGACTAAGCTGACGGCGACGTTG
GTTGGTACTGATGAGCAAACTGATTTGGCTGTGTTGAAGATTAATGCAAGCAAGGTATCAGAGGTAGCTGACTTTGCTAA
CTCAAGTAAGATTGAGCCGGGACAATCAGTTTTGGCCATCGGGTCACCATTGGGATCAGAGTATGCGACGTCAGTGACAG
AAGGAATCATTTCAGCAACGAAGCGTGAAGTCGATGCCACAAATGAGAATGGCGATTCACTCGGTAAGGCCACGGTTATC
CAAACGGACGCGGCAATTAATCCCGGAAACTCAGGTGGCCCATTGGTAAACTTGGCCGGTCAAGTCGTTGGTATCAACTC
AATGAAGTTGGCATCGTCAACTGACGGTACGTCGGTAGAAGGAATGGGATTTGCGATTCCGGCTAACACGGTAGTCAACA
TCATTAACGAGTTGGAGAAGAATGGAAAGGTTGAACGACCAGCTTTGGGCGTTTCAATGGTTGATTTGAGTAACGTCTCA
ACGACGGATCAATCAACAATCTTGAAGTTGCCAACCAGCGTTTCAGGTGGTGTCGTGGTCATCAGTACTGAAGATGGTTC
AGCAGCAGCGACTGCGGGCTTGAAGAAGTACGATGTGATTACCAAGATTGACGATACTGAGGTTACTGGTTCGGGTGACT
TGCGAGATGCTTTGTATAAGCACAAGGTTGGTGACACGATTAAGGTAACTTACTACCGCGATGGTAAGCAAAAGACGACT
GACGTGAAATTGACGAAGACAACGAGCTCATTATCAACGAAGTCAGAAGCAAATCAAAACTAA
ATGAAAAAGACATCAACCACAAAAATAGCAATTATCGGAATTGTTGCCGGGCTAGTCGGCGGTGGTGCCGCTGCTGGTGG
CGTAACTTACCTGAATAATGCCGGCACTTTTTCAACAGTCACGACTGGTAAGACGACACCGGTAAAGGTAAGTAACTCGA
ACGTGAAGGGCGAATCTGATGCAACGAAGGCCTTTAACAAGGTGTCGGGCGCAGTTGTGTCAGTGATTAACTTGCAAAAG
CAACAGTCACTTTCAGACAGTGGCTCATTATTTGGTGGGTTGTTTGGTGGTGATGAGTCATCGTCAAGTGATAGCAAGTC
AACGGATTCATCAGACCTTCAAACGGCTTCTGAGGGATCAGGAGTGGTTTACAAGAAGGATGGTAACACGGCTTATATCG
TCACGAACAACCACGTGGTTTCAGGGTCAAACGCGTTGCAAGTCTTGTTGAGCGATGGGACTAAGCTGACGGCGACGTTG
GTTGGTACTGATGAGCAAACTGATTTGGCTGTGTTGAAGATTAATGCAAGCAAGGTATCAGAGGTAGCTGACTTTGCTAA
CTCAAGTAAGATTGAGCCGGGACAATCAGTTTTGGCCATCGGGTCACCATTGGGATCAGAGTATGCGACGTCAGTGACAG
AAGGAATCATTTCAGCAACGAAGCGTGAAGTCGATGCCACAAATGAGAATGGCGATTCACTCGGTAAGGCCACGGTTATC
CAAACGGACGCGGCAATTAATCCCGGAAACTCAGGTGGCCCATTGGTAAACTTGGCCGGTCAAGTCGTTGGTATCAACTC
AATGAAGTTGGCATCGTCAACTGACGGTACGTCGGTAGAAGGAATGGGATTTGCGATTCCGGCTAACACGGTAGTCAACA
TCATTAACGAGTTGGAGAAGAATGGAAAGGTTGAACGACCAGCTTTGGGCGTTTCAATGGTTGATTTGAGTAACGTCTCA
ACGACGGATCAATCAACAATCTTGAAGTTGCCAACCAGCGTTTCAGGTGGTGTCGTGGTCATCAGTACTGAAGATGGTTC
AGCAGCAGCGACTGCGGGCTTGAAGAAGTACGATGTGATTACCAAGATTGACGATACTGAGGTTACTGGTTCGGGTGACT
TGCGAGATGCTTTGTATAAGCACAAGGTTGGTGACACGATTAAGGTAACTTACTACCGCGATGGTAAGCAAAAGACGACT
GACGTGAAATTGACGAAGACAACGAGCTCATTATCAACGAAGTCAGAAGCAAATCAAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| htrA | Streptococcus gordonii str. Challis substr. CH1 |
49.637 |
98.333 |
0.488 |
| htrA | Streptococcus mutans UA159 |
50.646 |
92.143 |
0.467 |
| htrA | Streptococcus mitis NCTC 12261 |
48.13 |
95.476 |
0.46 |
| htrA | Streptococcus pneumoniae TIGR4 |
51.676 |
85.238 |
0.44 |
| htrA | Streptococcus pneumoniae D39 |
51.676 |
85.238 |
0.44 |
| htrA | Streptococcus pneumoniae Rx1 |
51.676 |
85.238 |
0.44 |
| htrA | Streptococcus pneumoniae R6 |
51.676 |
85.238 |
0.44 |