Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   NMBM01240355_RS01905 Genome accession   NC_017517
Coordinates   356995..358227 (-) Length   410 a.a.
NCBI ID   WP_002216405.1    Uniprot ID   Q7DDR1
Organism   Neisseria meningitidis M01-240355     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 351995..363227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM01240355_RS01875 (NMBM01240355_0337) - 352528..352974 (+) 447 WP_014581766.1 DUF441 domain-containing protein -
  NMBM01240355_RS01885 (NMBM01240355_0339) pilF 353464..355140 (+) 1677 WP_002221967.1 type IV-A pilus assembly ATPase PilB Machinery gene
  NMBM01240355_RS01890 (NMBM01240355_0340) - 355225..355434 (-) 210 WP_002216401.1 DNA gyrase inhibitor YacG -
  NMBM01240355_RS01895 (NMBM01240355_0341) coaE 355427..356059 (-) 633 WP_014581767.1 dephospho-CoA kinase -
  NMBM01240355_RS01900 (NMBM01240355_0342) pilD 356061..356921 (-) 861 WP_014581768.1 A24 family peptidase Machinery gene
  NMBM01240355_RS01905 (NMBM01240355_0343) pilG 356995..358227 (-) 1233 WP_002216405.1 type 4 pilus assembly protein PilG Machinery gene
  NMBM01240355_RS01910 (NMBM01240355_0344) pgi 358737..360320 (+) 1584 WP_014581769.1 glucose-6-phosphate isomerase -
  NMBM01240355_RS12105 - 360290..360520 (+) 231 WP_025462714.1 hypothetical protein -
  NMBM01240355_RS01915 (NMBM01240355_0345) dapD 360530..361351 (+) 822 WP_002226039.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  NMBM01240355_RS01920 (NMBM01240355_0346) fabI 361506..362291 (+) 786 WP_002223367.1 enoyl-ACP reductase FabI -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 45273.29 Da        Isoelectric Point: 9.9273

>NTDB_id=48092 NMBM01240355_RS01905 WP_002216405.1 356995..358227(-) (pilG) [Neisseria meningitidis M01-240355]
MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVA

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=48092 NMBM01240355_RS01905 WP_002216405.1 356995..358227(-) (pilG) [Neisseria meningitidis M01-240355]
ATGGCTAAAAACGGAGGATTTTCTTTGTTCGCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCCGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTGGCAAAACGCGGCATCCGCCCAT
TGCAGATTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTTTTCACCCGCCAGCTTTCC
ACGATGATTAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGAGGCGAAGTGGAACAGGGCAGCTCGTTGAGCCGCGCATTCTCAAACCACCCGAAATATTTCG
ACCGCTTCTACTGCAACCTGGTTGCGGCGGGCGAAACGGGCGGCGTATTGGAAAGCCTGCTGGACAAATTGGCAATTTAC
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCGCTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTGGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAAGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTTAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCATACTGCTGCGTATGCCGATTTT
CGGAGACATTGTCCGCAAAGGGACGATTGCCCGCTGGGGCAGGACGACAGCGACGCTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACCCGGGAAATCCGTACGCGCGTC
ATCCAAGGTTTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGTTGCAGATGTCTTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTACGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTAGGCTTGGTCATCGGCACGCTTCTGGTCGCCATGTATCTG
CCGCTGTTTAATTTGGGCAACGTGGTCGCCTGA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(75-198)

Type II secretion system (T2SS), protein F (T2SSF)

(281-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q7DDR1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

99.268

100

0.993
  pilG Neisseria meningitidis 44/76-A

98.537

100

0.985
  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461
  pilC Acinetobacter baylyi ADP1

45.614

97.317

0.444
  pilC Pseudomonas stutzeri DSM 10701

44.913

98.293

0.441
  pilC Legionella pneumophila strain ERS1305867

44.836

96.829

0.434
  pilC Vibrio cholerae strain A1552

41.045

98.049

0.402
  pilC Vibrio campbellii strain DS40M4

39.163

99.024

0.388

Multiple sequence alignment