Detailed information NTG0480578

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: IAR44_RS17110
• Genome accession: NZ_CP061087
• Coordinates: 3509407..3510570 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain CLA178
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3504407..3515570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAR44_RS17080 (IAR44_17080)	-	3504672..3505091 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
IAR44_RS17085 (IAR44_17085)	comFC	3505165..3505854 (-)	690	WP_198039463.1	phosphoribosyltransferase family protein	Machinery gene
IAR44_RS17090 (IAR44_17090)	-	3505860..3506144 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
IAR44_RS17095 (IAR44_17095)	comFA	3506202..3507587 (-)	1386	WP_061860920.1	DEAD/DEAH box helicase	Machinery gene
IAR44_RS17100 (IAR44_17100)	-	3507695..3508543 (-)	849	WP_061860921.1	DegV family protein	-
IAR44_RS17105 (IAR44_17105)	degU	3508641..3509330 (-)	690	WP_061860922.1	two-component system response regulator DegU	Regulator
IAR44_RS17110 (IAR44_17110)	degS	3509407..3510570 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
IAR44_RS17115 (IAR44_17115)	-	3510793..3511440 (+)	648	WP_007407485.1	YigZ family protein	-
IAR44_RS17120 (IAR44_17120)	-	3511445..3512659 (+)	1215	WP_015418337.1	LCP family protein	-
IAR44_RS17125 (IAR44_17125)	-	3512758..3513834 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
IAR44_RS17130 (IAR44_17130)	-	3513967..3515163 (-)	1197	WP_060673980.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=480578 IAR44_RS17110 WP_007407484.1 3509407..3510570(-) (degS) [Bacillus velezensis strain CLA178]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=480578 IAR44_RS17110 WP_007407484.1 3509407..3510570(-) (degS) [Bacillus velezensis strain CLA178]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGTGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951