Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IAR44_RS02025 Genome accession   NZ_CP061087
Coordinates   434731..435684 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain CLA178     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 429731..440684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAR44_RS02000 (IAR44_02000) - 429779..431212 (+) 1434 WP_162492834.1 HAMP domain-containing sensor histidine kinase -
  IAR44_RS02005 (IAR44_02005) rapC 431364..432512 (+) 1149 WP_033575082.1 Rap family tetratricopeptide repeat protein Regulator
  IAR44_RS02010 (IAR44_02010) phrC 432496..432615 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  IAR44_RS02015 (IAR44_02015) - 432763..432873 (-) 111 WP_370529518.1 YjcZ family sporulation protein -
  IAR44_RS02020 (IAR44_02020) - 432953..434317 (-) 1365 WP_061861151.1 aspartate kinase -
  IAR44_RS02025 (IAR44_02025) ceuB 434731..435684 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  IAR44_RS02030 (IAR44_02030) - 435674..436621 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  IAR44_RS02035 (IAR44_02035) - 436615..437373 (+) 759 WP_061861152.1 ABC transporter ATP-binding protein -
  IAR44_RS02040 (IAR44_02040) - 437395..438339 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  IAR44_RS02045 (IAR44_02045) - 438381..439805 (-) 1425 WP_015416813.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=480522 IAR44_RS02025 WP_015239156.1 434731..435684(+) (ceuB) [Bacillus velezensis strain CLA178]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=480522 IAR44_RS02025 WP_015239156.1 434731..435684(+) (ceuB) [Bacillus velezensis strain CLA178]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGAATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536