Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   IAR44_RS02010 Genome accession   NZ_CP061087
Coordinates   432496..432615 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain CLA178     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 427496..437615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAR44_RS01995 (IAR44_01995) - 429109..429792 (+) 684 WP_007410267.1 response regulator transcription factor -
  IAR44_RS02000 (IAR44_02000) - 429779..431212 (+) 1434 WP_162492834.1 HAMP domain-containing sensor histidine kinase -
  IAR44_RS02005 (IAR44_02005) rapC 431364..432512 (+) 1149 WP_033575082.1 Rap family tetratricopeptide repeat protein Regulator
  IAR44_RS02010 (IAR44_02010) phrC 432496..432615 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  IAR44_RS02015 (IAR44_02015) - 432763..432873 (-) 111 WP_370529518.1 YjcZ family sporulation protein -
  IAR44_RS02020 (IAR44_02020) - 432953..434317 (-) 1365 WP_061861151.1 aspartate kinase -
  IAR44_RS02025 (IAR44_02025) ceuB 434731..435684 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  IAR44_RS02030 (IAR44_02030) - 435674..436621 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  IAR44_RS02035 (IAR44_02035) - 436615..437373 (+) 759 WP_061861152.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=480521 IAR44_RS02010 WP_003156334.1 432496..432615(+) (phrC) [Bacillus velezensis strain CLA178]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=480521 IAR44_RS02010 WP_003156334.1 432496..432615(+) (phrC) [Bacillus velezensis strain CLA178]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718