Detailed information NTG0480520

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: IAR44_RS02005
• Genome accession: NZ_CP061087
• Coordinates: 431364..432512 (+)
• Length: 382 a.a.
• NCBI ID: WP_033575082.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CLA178
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 426364..437512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAR44_RS01985 (IAR44_01985)	-	426762..427445 (-)	684	WP_033575085.1	ABC transporter ATP-binding protein	-
IAR44_RS01990 (IAR44_01990)	-	427460..428896 (-)	1437	WP_187954896.1	ABC transporter permease	-
IAR44_RS01995 (IAR44_01995)	-	429109..429792 (+)	684	WP_007410267.1	response regulator transcription factor	-
IAR44_RS02000 (IAR44_02000)	-	429779..431212 (+)	1434	WP_162492834.1	HAMP domain-containing sensor histidine kinase	-
IAR44_RS02005 (IAR44_02005)	rapC	431364..432512 (+)	1149	WP_033575082.1	Rap family tetratricopeptide repeat protein	Regulator
IAR44_RS02010 (IAR44_02010)	phrC	432496..432615 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
IAR44_RS02015 (IAR44_02015)	-	432763..432873 (-)	111	WP_370529518.1	YjcZ family sporulation protein	-
IAR44_RS02020 (IAR44_02020)	-	432953..434317 (-)	1365	WP_061861151.1	aspartate kinase	-
IAR44_RS02025 (IAR44_02025)	ceuB	434731..435684 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
IAR44_RS02030 (IAR44_02030)	-	435674..436621 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
IAR44_RS02035 (IAR44_02035)	-	436615..437373 (+)	759	WP_061861152.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45491.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=480520 IAR44_RS02005 WP_033575082.1 431364..432512(+) (rapC) [Bacillus velezensis strain CLA178]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISSCFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=480520 IAR44_RS02005 WP_033575082.1 431364..432512(+) (rapC) [Bacillus velezensis strain CLA178]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTACTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCTCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568