Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   IBL27_RS02830 Genome accession   NZ_CP061071
Coordinates   533933..534934 (+) Length   333 a.a.
NCBI ID   WP_002262797.1    Uniprot ID   A0AAX1K324
Organism   Streptococcus mutans B04Sm5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 528933..539934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS02795 (IBL27_02795) smpB 529446..529913 (+) 468 WP_002309134.1 SsrA-binding protein SmpB -
  IBL27_RS02800 (IBL27_02800) - 529967..530359 (-) 393 WP_002280314.1 VOC family protein -
  IBL27_RS02805 (IBL27_02805) - 530395..531060 (-) 666 WP_019806113.1 NAD(P)H-dependent oxidoreductase -
  IBL27_RS02810 (IBL27_02810) - 531155..531400 (+) 246 Protein_511 carbonic anhydrase precursor -
  IBL27_RS02815 (IBL27_02815) - 531367..531867 (+) 501 Protein_512 carbonic anhydrase -
  IBL27_RS02820 (IBL27_02820) - 531994..532575 (+) 582 WP_002262795.1 CDP-archaeol synthase -
  IBL27_RS02825 (IBL27_02825) - 532691..533770 (-) 1080 WP_002309138.1 M24 family metallopeptidase -
  IBL27_RS02830 (IBL27_02830) ccpA 533933..534934 (+) 1002 WP_002262797.1 catabolite control protein A Regulator
  IBL27_RS02835 (IBL27_02835) - 535082..536542 (+) 1461 WP_002309139.1 alpha-amylase -
  IBL27_RS02840 (IBL27_02840) - 536652..537650 (+) 999 WP_002278505.1 glycosyltransferase -
  IBL27_RS02845 (IBL27_02845) - 537652..538986 (+) 1335 WP_002269198.1 glycosyltransferase family 4 protein -
  IBL27_RS02850 (IBL27_02850) - 539065..539256 (+) 192 WP_002266172.1 hypothetical protein -
  IBL27_RS02855 (IBL27_02855) - 539250..539894 (+) 645 WP_002309147.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36613.89 Da        Isoelectric Point: 6.8583

>NTDB_id=480238 IBL27_RS02830 WP_002262797.1 533933..534934(+) (ccpA) [Streptococcus mutans B04Sm5]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=480238 IBL27_RS02830 WP_002262797.1 533933..534934(+) (ccpA) [Streptococcus mutans B04Sm5]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGAAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATTTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556