Detailed information NTG0479828

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: IBC03_RS06965
• Genome accession: NZ_CP061025
• Coordinates: 1347161..1348246 (-)
• Length: 361 a.a.
• NCBI ID: WP_011226304.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 13496
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1342161..1353246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBC03_RS06935 (IBC03_06950)	-	1342525..1343340 (-)	816	WP_014608539.1	Cof-type HAD-IIB family hydrolase	-
IBC03_RS06940 (IBC03_06955)	-	1343333..1344127 (-)	795	WP_138496582.1	HAD family hydrolase	-
IBC03_RS06945 (IBC03_06960)	-	1344312..1344689 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
IBC03_RS06950 (IBC03_06965)	-	1344694..1345392 (+)	699	WP_014608540.1	ABC transporter ATP-binding protein	-
IBC03_RS06955 (IBC03_06970)	-	1345404..1346189 (+)	786	WP_002951425.1	hypothetical protein	-
IBC03_RS06960 (IBC03_06975)	amiF	1346239..1347168 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
IBC03_RS06965 (IBC03_06980)	amiE	1347161..1348246 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
IBC03_RS06970 (IBC03_06985)	amiD	1348256..1349182 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
IBC03_RS06975 (IBC03_06990)	amiC	1349182..1350675 (-)	1494	WP_011227407.1	ABC transporter permease	Regulator
IBC03_RS06980 (IBC03_06995)	-	1350737..1352706 (-)	1970	Protein_1333	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39864.62 Da
• Isoelectric Point: 4.7435

>NTDB_id=479828 IBC03_RS06965 WP_011226304.1 1347161..1348246(-) (amiE) [Streptococcus thermophilus strain 13496]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide

• Length: 1086 bp

>NTDB_id=479828 IBC03_RS06965 WP_011226304.1 1347161..1348246(-) (amiE) [Streptococcus thermophilus strain 13496]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	100	100	1
amiE	Streptococcus thermophilus LMD-9	100	100	1
amiE	Streptococcus salivarius strain HSISS4	96.953	100	0.97
oppD	Streptococcus mutans UA159	54.441	96.676	0.526