Detailed information NTG0479816

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: IBC03_RS03390
• Genome accession: NZ_CP061025
• Coordinates: 635313..636314 (+)
• Length: 333 a.a.
• NCBI ID: WP_004197422.1
• Uniprot ID: Q9L6X0
• Organism: Streptococcus thermophilus strain 13496
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 630313..641314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBC03_RS03370 (IBC03_03375)	smpB	631420..631884 (+)	465	WP_002950240.1	SsrA-binding protein SmpB	-
IBC03_RS03375 (IBC03_03380)	-	632038..633444 (+)	1407	WP_011680934.1	Cof-type HAD-IIB family hydrolase	-
IBC03_RS03380 (IBC03_03385)	-	633446..633811 (+)	366	WP_002950243.1	S1 RNA-binding domain-containing protein	-
IBC03_RS03385 (IBC03_03390)	-	633914..634999 (-)	1086	WP_011680935.1	Xaa-Pro peptidase family protein	-
IBC03_RS03390 (IBC03_03395)	ccpA	635313..636314 (+)	1002	WP_004197422.1	catabolite control protein A	Regulator
IBC03_RS03395 (IBC03_03400)	-	636373..636570 (+)	198	WP_014608125.1	hypothetical protein	-
IBC03_RS10040	-	636676..636900 (+)	225	WP_224102938.1	MmcQ/YjbR family DNA-binding protein	-
IBC03_RS03400 (IBC03_03405)	-	636901..637440 (+)	540	WP_011680936.1	hypothetical protein	-
IBC03_RS03405 (IBC03_03410)	-	637453..638568 (+)	1116	WP_011680937.1	glycerate kinase	-
IBC03_RS03410 (IBC03_03415)	-	638615..639070 (-)	456	WP_011680938.1	YueI family protein	-
IBC03_RS03415 (IBC03_03420)	eno	639279..640583 (+)	1305	WP_011680939.1	surface-displayed alpha-enolase	-
IBC03_RS03420 (IBC03_03425)	-	640735..640920 (-)	186	WP_011680940.1	hypothetical protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36597.53 Da
• Isoelectric Point: 5.8841

>NTDB_id=479816 IBC03_RS03390 WP_004197422.1 635313..636314(+) (ccpA) [Streptococcus thermophilus strain 13496]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIVNSYFA
TLAKGIDDIATMYKYNIVLASSDDNEDHEVTVIHSLISKQVDGIIFMGHHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDCVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKSGLEKNNLSYNEGLVFEAKYSYKDGFELAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVTSYTRPNLSSINHPLYDLGAVSMRMLTKIMHKEELEDKDV
ILNHGLTLRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=479816 IBC03_RS03390 WP_004197422.1 635313..636314(+) (ccpA) [Streptococcus thermophilus strain 13496]
ATGAATACTGATGAAACAATCACAATTTATGATGTAGCGCGTGAAGCTGGAGTATCGATGGCAACTGTTTCTCGTGTTGT
AAATGGTAACAAAAACGTAAAAGAAAACACCCGAAAAAAAGTGCTCGAAGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCAAGTAAAAAAACAACTACTGTAGGAGTTGTCATTCCAAATATTGTAAATAGCTATTTTGCT
ACTCTAGCTAAAGGTATTGATGACATTGCAACCATGTATAAGTATAATATTGTTCTTGCTTCCAGTGATGATAATGAGGA
TCATGAAGTTACAGTCATTCATTCTCTAATTTCTAAACAAGTTGATGGTATTATTTTTATGGGACACCATCTGACAGAAA
AAATCCGTGCAGAATTCTCTCGTACCCGTACACCGATTGTTCTAGCAGGAACAGTTGATCTCGAACACCAATTACCAAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTGTGTAACGCAACTTGCTAAAAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAACTACGTTTGGCCGGGTATAAGTCTGGACTTGAAAAGAATAATTTGAGCT
ACAACGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGAGTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGCAAATCAGTTCC
AGAAGATTTCGAAATCATCACAAGCAATGATTCACCGGTTACAAGCTACACACGTCCAAACCTTTCTAGTATAAACCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATTATGCATAAGGAAGAACTTGAAGATAAAGACGTT
ATTCTTAATCATGGTCTAACTTTACGCCAGTCAACAAAATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (182-332)

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

3D structure

• AlphaFold DB: Q9L6X0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus gordonii str. Challis substr. CH1	76.276	100	0.763
ccpA	Streptococcus pneumoniae D39	75.375	100	0.754
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	54.985	99.399	0.547