Detailed information NTG0479471

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: IBC08_RS03285
• Genome accession: NZ_CP061019
• Coordinates: 616866..617867 (+)
• Length: 333 a.a.
• NCBI ID: WP_004197422.1
• Uniprot ID: Q9L6X0
• Organism: Streptococcus thermophilus strain 24853
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 611866..622867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBC08_RS03265 (IBC08_03240)	smpB	612973..613437 (+)	465	WP_002950240.1	SsrA-binding protein SmpB	-
IBC08_RS03270 (IBC08_03245)	-	613591..614997 (+)	1407	WP_011680934.1	Cof-type HAD-IIB family hydrolase	-
IBC08_RS03275 (IBC08_03250)	-	614999..615364 (+)	366	WP_002950243.1	S1 RNA-binding domain-containing protein	-
IBC08_RS03280 (IBC08_03255)	-	615467..616552 (-)	1086	WP_011680935.1	Xaa-Pro peptidase family protein	-
IBC08_RS03285 (IBC08_03260)	ccpA	616866..617867 (+)	1002	WP_004197422.1	catabolite control protein A	Regulator
IBC08_RS03290 (IBC08_03265)	-	617926..618123 (+)	198	WP_014608125.1	hypothetical protein	-
IBC08_RS09845	-	618229..618453 (+)	225	WP_224102938.1	MmcQ/YjbR family DNA-binding protein	-
IBC08_RS03295 (IBC08_03270)	-	618454..618993 (+)	540	WP_011680936.1	hypothetical protein	-
IBC08_RS03300 (IBC08_03275)	-	619006..620121 (+)	1116	WP_011680937.1	glycerate kinase	-
IBC08_RS03305 (IBC08_03280)	-	620168..620623 (-)	456	WP_011680938.1	YueI family protein	-
IBC08_RS03310 (IBC08_03285)	eno	620832..622136 (+)	1305	WP_011680939.1	surface-displayed alpha-enolase	-
IBC08_RS03315 (IBC08_03290)	-	622288..622473 (-)	186	WP_011680940.1	hypothetical protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36597.53 Da
• Isoelectric Point: 5.8841

>NTDB_id=479471 IBC08_RS03285 WP_004197422.1 616866..617867(+) (ccpA) [Streptococcus thermophilus strain 24853]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIVNSYFA
TLAKGIDDIATMYKYNIVLASSDDNEDHEVTVIHSLISKQVDGIIFMGHHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDCVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKSGLEKNNLSYNEGLVFEAKYSYKDGFELAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVTSYTRPNLSSINHPLYDLGAVSMRMLTKIMHKEELEDKDV
ILNHGLTLRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=479471 IBC08_RS03285 WP_004197422.1 616866..617867(+) (ccpA) [Streptococcus thermophilus strain 24853]
ATGAATACTGATGAAACAATCACAATTTATGATGTAGCGCGTGAAGCTGGAGTATCGATGGCAACTGTTTCTCGTGTTGT
AAATGGTAACAAAAACGTAAAAGAAAACACCCGAAAAAAAGTGCTCGAAGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCAAGTAAAAAAACAACTACTGTAGGAGTTGTCATTCCAAATATTGTAAATAGCTATTTTGCT
ACTCTAGCTAAAGGTATTGATGACATTGCAACCATGTATAAGTATAATATTGTTCTTGCTTCCAGTGATGATAATGAGGA
TCATGAAGTTACAGTCATTCATTCTCTAATTTCTAAACAAGTTGATGGTATTATTTTTATGGGACACCATCTGACAGAAA
AAATCCGTGCAGAATTCTCTCGTACCCGTACACCGATTGTTCTAGCAGGAACAGTTGATCTCGAACACCAATTACCAAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTGTGTAACGCAACTTGCTAAAAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAACTACGTTTGGCCGGGTATAAGTCTGGACTTGAAAAGAATAATTTGAGCT
ACAACGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGAGTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGCAAATCAGTTCC
AGAAGATTTCGAAATCATCACAAGCAATGATTCACCGGTTACAAGCTACACACGTCCAAACCTTTCTAGTATAAACCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATTATGCATAAGGAAGAACTTGAAGATAAAGACGTT
ATTCTTAATCATGGTCTAACTTTACGCCAGTCAACAAAATAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (182-332)

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

3D structure

• AlphaFold DB: Q9L6X0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus gordonii str. Challis substr. CH1	76.276	100	0.763
ccpA	Streptococcus pneumoniae D39	75.375	100	0.754
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	54.985	99.399	0.547