Detailed information NTG0479358

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: IAG34_RS13985
• Genome accession: NZ_CP060994
• Coordinates: 2835613..2838045 (-)
• Length: 810 a.a.
• NCBI ID: WP_139845778.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain CAb-65
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2830937..2841201	2835613..2838045	within	0

Gene organization within MGE regions

Location: 2830937..2841201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAG34_RS13960 (IAG34_13955)	purM	2830937..2832007 (+)	1071	WP_000071986.1	phosphoribosylformylglycinamidine cyclo-ligase	-
IAG34_RS13965 (IAG34_13960)	purN	2832004..2832633 (+)	630	WP_000975535.1	phosphoribosylglycinamide formyltransferase	-
IAG34_RS13970 (IAG34_13965)	-	2832697..2833506 (-)	810	WP_000114071.1	alpha/beta fold hydrolase	-
IAG34_RS13975 (IAG34_13970)	sppA	2833525..2834541 (-)	1017	WP_001286612.1	signal peptide peptidase SppA	-
IAG34_RS13980 (IAG34_13975)	-	2834677..2835660 (+)	984	WP_086267300.1	lysophospholipid acyltransferase family protein	-
IAG34_RS13985 (IAG34_13980)	comA/comEC	2835613..2838045 (-)	2433	WP_139845778.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
IAG34_RS13990 (IAG34_13985)	lolD	2838131..2838817 (-)	687	WP_000049406.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
IAG34_RS13995 (IAG34_13990)	-	2838810..2840045 (-)	1236	WP_001984636.1	lipoprotein-releasing ABC transporter permease subunit	-
IAG34_RS19515	-	2840183..2840263 (+)	81	Protein_2753	PilZ domain-containing protein	-
IAG34_RS14000 (IAG34_13995)	-	2840293..2841201 (-)	909	WP_001140078.1	DMT family transporter	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92529.80 Da
• Isoelectric Point: 8.4863

>NTDB_id=479358 IAG34_RS13985 WP_139845778.1 2835613..2838045(-) (comA/comEC) [Acinetobacter baumannii strain CAb-65]
MFKIILLGWIGGIALMGIDFPLIMQYEKVGEALLLLAFIFYLYKRPMFVDRPFLKAVFCLLCTTSLFMVGYHYAEKALIE
RLEQRETDTRNLDIIVYINRLSEEKDNKVQQTAQVLNFSKEPVNWLLYLKSNNQNLLKNNQNLELGHYYRISGKTRPAHS
YATSGAFDQEKWFIQRNIMSGFNVRYIEPLSLDEIYRLGYQQHLKEQQSFSNSFRLNIEKLRLTFRQILNSSSLQQKGLI
LALLTGDESLLSDETQLQFKQLGISHLLAISGPHVLIFAIMLSWACHQFISRYYPQIYLWKPKQVLMAVPCCLGVLIYTA
FVGFEIPALRTFLSVLIFIGFLLLKQPIKPFTLLVYSASLLLLMDPFSVLSAGFWLSYGACFILLRIYQTIAQLPEQHFL
SLSSKMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGSVIVPLNIMAACAWFVIKPFGNMLFHFND
MLLSILLSCLGLLEKLSLTLQGISLTPLSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQ
AIFLQHPEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVRQLDHVVLSHLDQDHSGAFPLIQQEIPVKQLISNEQLPND
LKQPFQYCHQGQQWHYPELDIQILWPKEKDLAFVASNQNQYSCVVYLQFKKVGGYQNFLIMGDAGWEAEYELLKDYPNLK
IDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQEVIARLKALHIPLKSTVEQGTLNFVLENHKIVLHDRR
LDRLWLSRGF

Nucleotide

• Length: 2433 bp

>NTDB_id=479358 IAG34_RS13985 WP_139845778.1 2835613..2838045(-) (comA/comEC) [Acinetobacter baumannii strain CAb-65]
ATGTTTAAGATTATTCTATTGGGGTGGATTGGCGGTATTGCATTGATGGGAATAGATTTCCCTTTAATCATGCAATATGA
AAAAGTGGGCGAGGCTCTACTGTTACTTGCCTTTATTTTTTATCTTTATAAACGACCAATGTTCGTTGATCGACCATTTT
TAAAGGCAGTGTTTTGCTTATTATGTACAACAAGTCTTTTTATGGTTGGTTACCACTATGCTGAAAAAGCACTGATTGAA
CGATTAGAACAAAGAGAAACAGATACCCGAAATCTCGACATTATTGTTTATATAAACCGTTTAAGTGAAGAAAAAGATAA
TAAGGTTCAACAAACTGCACAAGTTCTAAATTTTTCTAAAGAACCGGTGAATTGGTTGCTATATTTAAAAAGTAATAATC
AAAATTTATTAAAGAATAATCAGAATCTTGAATTAGGTCACTATTATCGAATATCTGGGAAAACAAGACCTGCGCATAGT
TATGCCACCTCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATTATGTCTGGTTTTAACGTGAGATATAT
TGAGCCTTTAAGCCTTGATGAAATCTATCGATTGGGCTATCAGCAACATTTAAAAGAACAACAGTCTTTTTCTAATAGTT
TTCGTTTAAATATAGAAAAACTTCGCTTAACTTTTAGACAAATATTAAACAGCTCATCTTTACAGCAAAAGGGTTTAATT
TTAGCTTTGCTGACAGGTGATGAAAGCCTTTTATCAGATGAAACTCAACTACAGTTCAAACAATTAGGAATTAGTCATTT
ATTGGCGATCTCAGGCCCACATGTGCTCATTTTTGCCATTATGTTATCTTGGGCATGTCATCAATTTATCAGTCGTTATT
ATCCTCAAATTTACTTATGGAAACCGAAACAGGTTTTGATGGCTGTACCATGCTGCCTTGGTGTTTTAATTTATACTGCA
TTTGTAGGTTTCGAAATTCCTGCACTACGAACATTCCTATCAGTCCTTATATTTATTGGTTTTCTATTATTAAAACAACC
TATTAAACCTTTTACATTACTCGTATATAGCGCAAGTCTACTGTTGCTAATGGACCCGTTTAGTGTACTTTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTACCAAACTATAGCGCAGCTACCTGAGCAACATTTTTTG
AGTCTGAGTTCAAAAATGATTTTTATGAGTAAGGTATTAATTGAATCTCAAGGCAAAATATTTATTGCATTGAGTCCTTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGGTTGCTCCATTAACCAATATTATTGCCGTGCCTATTGTTGGTAGTGTTA
TTGTCCCTTTAAACATCATGGCTGCTTGCGCATGGTTTGTAATAAAACCATTTGGAAATATGCTTTTTCATTTCAATGAT
ATGTTGCTCAGCATATTGCTGAGTTGTTTGGGCTTATTAGAAAAACTCTCTTTAACATTACAAGGTATAAGCTTGACGCC
ACTGTCTTTATTAGCGATTAGTTGTGCCATTATTATTTTATTTTTACCTAAAGGAATTCTGCCCAAAACTTGGGGAATAT
TATGTTGTTTACCCTTAGTTATTATGAACAAAACGAGTCAGCAAATTCAGCTTAATATTTTAGATGTTGGGCAGGGGCAG
GCTATTTTTCTACAACATCCCGAACAAAACTGGTTAATTGACACAGGCGGTTCTTACGATGAAAAAATATTTAGTATTGG
ACAAAATGTTGTAGTGCCTTTTCTACGTCAGCAAGGCGTAAGACAACTAGATCATGTTGTGCTATCCCATCTTGATCAAG
ACCATAGTGGCGCGTTTCCTCTTATTCAACAAGAGATTCCTGTAAAGCAGCTTATTTCGAATGAACAATTACCAAATGAT
TTAAAGCAACCATTCCAATATTGCCATCAAGGGCAACAATGGCATTATCCTGAGTTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATCTGGCTTTTGTTGCTTCTAACCAGAATCAATATTCTTGTGTTGTATATCTTCAATTTAAAAAAGTTGGTG
GTTACCAAAATTTTCTTATTATGGGCGATGCTGGATGGGAAGCTGAATACGAGTTATTAAAAGATTATCCTAACTTGAAG
ATAGATGTGTTAGTGCTAGGGCATCATGGAAGTAAGCACAGTTCGGCTTATGATTTCTTGGCGACCTTAAAACCTAAACT
GGCCATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAAGAAGTTATAGCACGTTTAAAAGCTCTACATA
TTCCGCTAAAAAGTACTGTGGAACAAGGGACCTTAAATTTTGTATTGGAAAATCACAAAATAGTTTTACATGACCGTCGT
TTGGATAGGCTCTGGTTGAGTAGAGGTTTTTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-639)

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

• Competence protein (Competence) (243-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	99.136	100	0.991
comA/comEC	Acinetobacter baumannii strain A118	97.284	100	0.973
comA/comEC	Acinetobacter baylyi ADP1	50.308	100	0.504