Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IAQ69_RS11515 Genome accession   NZ_CP060811
Coordinates   2419861..2420244 (-) Length   127 a.a.
NCBI ID   WP_004784987.1    Uniprot ID   N9NVI8
Organism   Acinetobacter variabilis strain XM9F202-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2414861..2425244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAQ69_RS11500 (IAQ69_11495) - 2416809..2418878 (-) 2070 WP_200228923.1 methyl-accepting chemotaxis protein -
  IAQ69_RS11505 (IAQ69_11500) - 2418925..2419461 (-) 537 WP_159123371.1 chemotaxis protein CheW -
  IAQ69_RS11510 (IAQ69_11505) - 2419467..2419835 (-) 369 WP_004784985.1 response regulator -
  IAQ69_RS11515 (IAQ69_11510) pilG 2419861..2420244 (-) 384 WP_004784987.1 twitching motility response regulator PilG Regulator
  IAQ69_RS11520 (IAQ69_11515) - 2420528..2421172 (+) 645 WP_159123370.1 hypothetical protein -
  IAQ69_RS11525 (IAQ69_11520) - 2421224..2422351 (+) 1128 WP_166139290.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14287.34 Da        Isoelectric Point: 4.7172

>NTDB_id=478539 IAQ69_RS11515 WP_004784987.1 2419861..2420244(-) (pilG) [Acinetobacter variabilis strain XM9F202-2]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=478539 IAQ69_RS11515 WP_004784987.1 2419861..2420244(-) (pilG) [Acinetobacter variabilis strain XM9F202-2]
ATGGACGATAAATTCCAAAATCTAAAAGTTATGGTCATTGATGACTCAAAGACCATTCGTCGTACAGCAGAAACTCTTCT
ACAGCGCGAAGGATATGAAGTCGTGACTGCGGTAGATGGTTTTGAAGCTTTGTCAAAAATCGCAGAAGCCAATCCGGATA
TCGTATTTGTAGACATCATGATGCCTCGTCTAGATGGTTATCAAACTTGTGCATTGATTAAAAATTCTCAAAATTATCAG
AATATTCCTGTGATTATGCTTTCGAGTAAAGATGGCTTATTTGATCAGGCCAAAGGTCGTGTTGTTGGTTCGGACGAATA
CTTGACTAAACCTTTCAGTAAAGATGAATTGCTTAACGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9NVI8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37