Detailed information NTG0478382

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: H9Q14_RS09295
• Genome accession: NZ_CP060794
• Coordinates: 1956925..1957899 (-)
• Length: 324 a.a.
• NCBI ID: WP_151368235.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain Z0118SE0260
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1951925..1962899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9Q14_RS09260	gcvT	1952443..1953534 (-)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-
H9Q14_RS09265	-	1953752..1954264 (-)	513	WP_002440040.1	shikimate kinase	-
H9Q14_RS09270	-	1954429..1954920 (-)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
H9Q14_RS09275	-	1954844..1955137 (-)	294	WP_001831116.1	hypothetical protein	-
H9Q14_RS09280	comGD	1955124..1955561 (-)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
H9Q14_RS09285	comGC	1955551..1955868 (-)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
H9Q14_RS09290	comGB	1955886..1956953 (-)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
H9Q14_RS09295	comGA	1956925..1957899 (-)	975	WP_151368235.1	competence type IV pilus ATPase ComGA	Machinery gene
H9Q14_RS09300	-	1957956..1958579 (-)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
H9Q14_RS09305	-	1958579..1958905 (-)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
H9Q14_RS09310	-	1958905..1959891 (-)	987	WP_001831113.1	ROK family glucokinase	-
H9Q14_RS09315	-	1959891..1960091 (-)	201	WP_001831138.1	YqgQ family protein	-
H9Q14_RS09320	-	1960075..1961535 (-)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
H9Q14_RS09325	-	1961536..1962087 (-)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
H9Q14_RS09330	rpmG	1962270..1962419 (-)	150	WP_001830957.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37356.47 Da
• Isoelectric Point: 8.8079

>NTDB_id=478382 H9Q14_RS09295 WP_151368235.1 1956925..1957899(-) (comGA) [Staphylococcus epidermidis strain Z0118SE0260]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGYLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=478382 H9Q14_RS09295 WP_151368235.1 1956925..1957899(-) (comGA) [Staphylococcus epidermidis strain Z0118SE0260]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGTATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698