Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   H7H20_RS02925 Genome accession   NZ_CP060732
Coordinates   622708..623118 (+) Length   136 a.a.
NCBI ID   WP_002017231.1    Uniprot ID   N9KEH5
Organism   Acinetobacter baumannii strain abA1     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 617708..628118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7H20_RS02910 - 618697..621003 (+) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  H7H20_RS02915 - 621048..621821 (-) 774 WP_000682841.1 SDR family oxidoreductase -
  H7H20_RS02920 mazG 621933..622739 (+) 807 WP_000359483.1 nucleoside triphosphate pyrophosphohydrolase -
  H7H20_RS02925 comEA 622708..623118 (+) 411 WP_002017231.1 ComEA family DNA-binding protein Machinery gene
  H7H20_RS02930 pcnB 623243..624706 (+) 1464 WP_001194207.1 polynucleotide adenylyltransferase PcnB -
  H7H20_RS02935 folK 624703..625185 (+) 483 WP_000219213.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  H7H20_RS02940 panB 625231..626040 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  H7H20_RS02945 panC 626044..626892 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  H7H20_RS02950 rapZ 626915..627766 (+) 852 WP_000821671.1 RNase adapter RapZ -
  H7H20_RS02955 - 627763..628032 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15654.89 Da        Isoelectric Point: 10.3828

>NTDB_id=478171 H7H20_RS02925 WP_002017231.1 622708..623118(+) (comEA) [Acinetobacter baumannii strain abA1]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=478171 H7H20_RS02925 WP_002017231.1 622708..623118(+) (comEA) [Acinetobacter baumannii strain abA1]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KEH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.794

100

0.978
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412