Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   H7791_RS01395 Genome accession   NZ_CP060644
Coordinates   263425..264927 (+) Length   500 a.a.
NCBI ID   WP_009880667.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1309     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 258425..269927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7791_RS01380 (H7791_01385) - 258478..259659 (-) 1182 WP_228634992.1 D-alanyl-D-alanine carboxypeptidase family protein -
  H7791_RS01385 (H7791_01390) pbp3 259827..261059 (-) 1233 WP_002992223.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  H7791_RS01390 (H7791_01395) amiA 261390..263360 (+) 1971 WP_002992224.1 peptide ABC transporter substrate-binding protein Regulator
  H7791_RS01395 (H7791_01400) amiC 263425..264927 (+) 1503 WP_009880667.1 ABC transporter permease Regulator
  H7791_RS01400 (H7791_01405) amiD 264927..265853 (+) 927 WP_002986004.1 oligopeptide ABC transporter permease OppC Regulator
  H7791_RS01405 (H7791_01410) amiE 265862..266932 (+) 1071 WP_010921893.1 ABC transporter ATP-binding protein Regulator
  H7791_RS01410 (H7791_01415) amiF 266925..267848 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  H7791_RS08725 (H7791_01420) - 267886..267969 (-) 84 Protein_235 IS3 family transposase -

Sequence

Protein


Download         Length: 500 a.a.        Molecular weight: 56135.49 Da        Isoelectric Point: 10.2222

>NTDB_id=477242 H7791_RS01395 WP_009880667.1 263425..264927(+) (amiC) [Streptococcus pyogenes strain TSPY1309]
MKKYILNRIMRSLVSVVLVTALTYTIVYTLVPTSLIFKQDPNYNKMTTTPDKKVAYENLTFQRMGYVNYFSSKELKDNAS
KVDSSVTTEATSANKAVYEKYIDSLGNGWQLKRFPTSKQFYAIRNIPIYERVWNFFSNLVVIDHPWKIQDKDNPKLARYI
RLEKDKSVGWSLVGSGTKHKYLLYTNGKFPYLHQNFVTLNLGTSYPTYSNIPVLQVISQGQGRTALQDVTFPSGVTKKSS
VDIYSRSYKNPKSLDDITKVNYGKGDSYTKTINNYVDPSMIHNSFVIGFFGVMFSYIVGLPLGLFMARFKNTYFDRFSTA
TMTFMLALPSIAVIYVVRFLGGMVGLPDSFPMLGASDPKSYILPALILGILNIPTTVIWFRRYLVDLQASDWVRFARSKG
LSESEIYRGHLFKNAMVPIVSGVPASIILAIGGATLTETVFAFPGMGKMLIDSIKSANNSMIVGLTFIFTVLSIVSLLLG
DIVMTLVDPRIKLSTKKGGK

Nucleotide


Download         Length: 1503 bp        

>NTDB_id=477242 H7791_RS01395 WP_009880667.1 263425..264927(+) (amiC) [Streptococcus pyogenes strain TSPY1309]
ATGAAAAAATACATTTTAAACCGTATCATGCGATCGTTAGTGTCGGTAGTTTTGGTAACGGCTTTAACATACACCATCGT
ATATACTCTAGTACCTACCAGCCTTATCTTTAAACAAGACCCTAATTATAATAAAATGACAACAACACCAGATAAAAAAG
TAGCGTATGAAAATCTAACTTTTCAACGTATGGGTTATGTCAATTATTTTTCAAGCAAAGAATTAAAAGATAATGCTTCT
AAAGTAGATAGTAGTGTAACGACAGAAGCAACTAGTGCTAACAAAGCTGTCTATGAGAAGTATATTGATTCTCTTGGCAA
TGGCTGGCAGCTAAAACGCTTCCCCACTAGCAAACAGTTTTATGCAATTCGCAATATTCCTATTTACGAACGTGTTTGGA
ACTTTTTCTCAAATCTAGTTGTTATTGATCACCCTTGGAAGATTCAGGATAAAGATAATCCAAAATTAGCTAGGTATATT
CGTCTAGAAAAAGATAAATCAGTTGGCTGGTCACTTGTTGGTTCGGGGACAAAACATAAATATCTCCTCTATACTAACGG
AAAATTTCCTTATCTTCACCAAAACTTTGTTACCCTAAACTTAGGAACATCTTATCCAACATACAGCAATATTCCTGTTC
TTCAGGTTATTTCACAAGGGCAAGGACGAACAGCTCTTCAAGATGTGACCTTCCCATCAGGTGTCACTAAGAAATCGTCA
GTGGATATCTATAGCCGTAGCTACAAAAATCCAAAATCATTGGATGATATCACCAAGGTAAACTATGGTAAGGGAGATTC
CTACACTAAAACCATCAATAATTATGTCGACCCATCAATGATTCACAATTCTTTTGTAATTGGTTTTTTTGGTGTTATGT
TTTCCTATATCGTTGGTTTGCCTCTTGGTTTATTTATGGCTCGGTTTAAAAATACCTATTTTGACCGTTTCTCAACAGCG
ACCATGACCTTCATGCTTGCTTTACCAAGTATTGCTGTTATCTATGTTGTTCGCTTCCTAGGTGGCATGGTTGGTTTACC
AGATAGTTTCCCAATGCTGGGGGCATCTGATCCTAAATCTTATATTTTACCAGCCCTTATTTTAGGAATTTTAAATATTC
CAACTACGGTTATCTGGTTCCGTCGCTATCTTGTTGACCTTCAGGCCAGCGATTGGGTACGTTTTGCGCGTTCAAAAGGA
TTATCAGAATCTGAAATTTACAGAGGGCATCTCTTCAAAAATGCCATGGTCCCAATTGTGTCAGGGGTTCCTGCAAGTAT
TATCCTTGCTATTGGTGGTGCAACCTTAACAGAGACTGTCTTTGCCTTCCCGGGTATGGGTAAAATGTTAATTGATTCTA
TTAAATCTGCTAACAATTCTATGATTGTTGGATTAACCTTTATCTTCACTGTCTTGTCAATTGTTTCACTTTTACTAGGA
GATATTGTCATGACCCTTGTCGATCCACGTATTAAATTGTCAACAAAAAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

59.4

100

0.594
  amiC Streptococcus thermophilus LMD-9

59.4

100

0.594
  amiC Streptococcus thermophilus LMG 18311

59

100

0.59