Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   H7792_RS06780 Genome accession   NZ_CP060643
Coordinates   1384656..1384811 (-) Length   51 a.a.
NCBI ID   WP_267249004.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY416     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1379656..1389811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7792_RS06755 (H7792_06745) - 1380459..1380860 (-) 402 WP_023605036.1 hypothetical protein -
  H7792_RS06760 (H7792_06750) - 1381054..1381335 (-) 282 WP_011054252.1 hypothetical protein -
  H7792_RS06765 (H7792_06755) - 1381874..1382074 (-) 201 WP_003060803.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  H7792_RS06770 (H7792_06760) - 1382087..1382314 (-) 228 WP_111713896.1 Blp family class II bacteriocin -
  H7792_RS06775 (H7792_06765) - 1382600..1384396 (+) 1797 Protein_1289 peptide cleavage/export ABC transporter -
  H7792_RS06780 comE/blpR 1384656..1384811 (-) 156 WP_267249004.1 LytTR family transcriptional regulator DNA-binding domain-containing protein Regulator
  H7792_RS06785 - 1385112..1385366 (+) 255 WP_011106868.1 hypothetical protein -
  H7792_RS06790 (H7792_06775) - 1385672..1386148 (-) 477 WP_002985741.1 NUDIX hydrolase -
  H7792_RS06795 (H7792_06780) era 1386168..1387064 (-) 897 WP_002985743.1 GTPase Era -
  H7792_RS06800 (H7792_06785) - 1387184..1387591 (-) 408 WP_002985746.1 diacylglycerol kinase family protein -
  H7792_RS06805 (H7792_06790) ybeY 1387572..1388069 (-) 498 WP_002985748.1 rRNA maturation RNase YbeY -
  H7792_RS06810 (H7792_06795) - 1388228..1388803 (-) 576 WP_009880369.1 uracil-DNA glycosylase family protein -

Sequence

Protein


Download         Length: 51 a.a.        Molecular weight: 6253.21 Da        Isoelectric Point: 8.9549

>NTDB_id=477215 H7792_RS06780 WP_267249004.1 1384656..1384811(-) (comE/blpR) [Streptococcus pyogenes strain TSPY416]
MVLYSTRERIEFYGELSEIVKQEPRLFQCHRSFVVNPYNISSIQRLERKVY

Nucleotide


Download         Length: 156 bp        

>NTDB_id=477215 H7792_RS06780 WP_267249004.1 1384656..1384811(-) (comE/blpR) [Streptococcus pyogenes strain TSPY416]
TTGGTTCTTTATTCTACTAGAGAAAGGATTGAATTTTATGGGGAGTTATCTGAAATCGTTAAGCAAGAACCAAGATTATT
TCAATGCCATCGATCATTTGTTGTTAATCCCTACAATATATCTTCAATACAACGATTAGAACGTAAGGTTTATTAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(3-48)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

58.824

100

0.588
  agrA Staphylococcus aureus N315

47.059

100

0.471
  comE/comE1 Streptococcus equinus JB1

37.255

100

0.373