Detailed information NTG0476593

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: JWY36_RS14055
• Genome accession: NZ_CP071276
• Coordinates: 2595537..2596142 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain JNFE0126
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2590537..2601142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWY36_RS14025 (JWY36_13895)	-	2591350..2591739 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
JWY36_RS14030 (JWY36_13900)	yajC	2591796..2592062 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
JWY36_RS14035 (JWY36_13905)	tgt	2592099..2593244 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
JWY36_RS14040 (JWY36_13910)	queA	2593271..2594299 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
JWY36_RS14045 (JWY36_13915)	yrzS	2594329..2594529 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
JWY36_RS14050 (JWY36_13920)	ruvB	2594522..2595526 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
JWY36_RS14055 (JWY36_13925)	ruvA	2595537..2596142 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
JWY36_RS14060 (JWY36_13930)	bofC	2596281..2596793 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
JWY36_RS14065 (JWY36_13935)	csbX	2596841..2598148 (-)	1308	WP_014480439.1	MFS transporter	-
JWY36_RS14070 (JWY36_13940)	iolG	2598219..2599244 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
JWY36_RS14075 (JWY36_13945)	yrzF	2599482..2600129 (+)	648	WP_014480441.1	phosphotransferase	-
JWY36_RS14080 (JWY36_13950)	-	2600175..2600297 (-)	123	WP_003229707.1	hypothetical protein	-
JWY36_RS14090 (JWY36_13955)	-	2600460..2600828 (+)	369	WP_186437837.1	DUF5412 family protein	-
JWY36_RS14095 (JWY36_13960)	-	2600835..2600975 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=476593 JWY36_RS14055 WP_003229717.1 2595537..2596142(-) (ruvA) [Bacillus subtilis strain JNFE0126]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=476593 JWY36_RS14055 WP_003229717.1 2595537..2596142(-) (ruvA) [Bacillus subtilis strain JNFE0126]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408