Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   H8N04_RS01005 Genome accession   NZ_CP060491
Coordinates   219803..220468 (+) Length   221 a.a.
NCBI ID   WP_000697886.1    Uniprot ID   A0A0D3QBD0
Organism   Staphylococcus aureus strain WH39     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 214803..225468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8N04_RS00980 (H8N04_00985) isaB 215000..215488 (+) 489 WP_048665617.1 immunodominant staphylococcal antigen IsaB family protein -
  H8N04_RS00995 (H8N04_01000) - 217955..219379 (-) 1425 WP_048665255.1 alkaline phosphatase -
  H8N04_RS01000 (H8N04_01005) - 219577..219777 (+) 201 WP_000604727.1 hypothetical protein -
  H8N04_RS01005 (H8N04_01010) braR 219803..220468 (+) 666 WP_000697886.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  H8N04_RS01010 (H8N04_01015) braS 220479..221366 (+) 888 WP_000143417.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  H8N04_RS01015 (H8N04_01020) - 221474..222229 (+) 756 WP_048665254.1 ABC transporter ATP-binding protein -
  H8N04_RS01020 (H8N04_01025) - 222226..224226 (+) 2001 WP_000776740.1 ABC transporter permease -
  H8N04_RS01025 (H8N04_01030) - 224885..224998 (+) 114 Protein_202 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25392.45 Da        Isoelectric Point: 4.6846

>NTDB_id=476296 H8N04_RS01005 WP_000697886.1 219803..220468(+) (braR) [Staphylococcus aureus strain WH39]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=476296 H8N04_RS01005 WP_000697886.1 219803..220468(+) (braR) [Staphylococcus aureus strain WH39]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAGAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAAAATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D3QBD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995