Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   H8S71_RS18555 Genome accession   NZ_CP060417
Coordinates   3632440..3632559 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3627440..3637559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS18535 (H8S71_18530) albG 3627604..3628305 (+) 702 WP_187001947.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  H8S71_RS18540 (H8S71_18535) ywhL 3628311..3629687 (-) 1377 WP_125121079.1 YncE family protein -
  H8S71_RS18545 (H8S71_18540) ywhK 3629726..3631081 (-) 1356 WP_038829813.1 YncE family protein -
  H8S71_RS20660 - 3631078..3631308 (-) 231 WP_125121078.1 hypothetical protein -
  H8S71_RS18550 (H8S71_18545) rapF 3631311..3632456 (+) 1146 WP_125121077.1 response regulator aspartate phosphatase RapF Regulator
  H8S71_RS18555 (H8S71_18550) phrF 3632440..3632559 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  H8S71_RS18560 (H8S71_18555) - 3632814..3633293 (+) 480 WP_103804110.1 hypothetical protein -
  H8S71_RS18565 (H8S71_18560) - 3633444..3634232 (+) 789 WP_038829810.1 membrane protein -
  H8S71_RS18570 (H8S71_18565) - 3634255..3634893 (+) 639 WP_205831735.1 hypothetical protein -
  H8S71_RS18575 (H8S71_18570) - 3634909..3635700 (+) 792 WP_250623939.1 hypothetical protein -
  H8S71_RS18580 (H8S71_18575) - 3635703..3636350 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  H8S71_RS18585 (H8S71_18580) - 3636343..3636903 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=475926 H8S71_RS18555 WP_009968329.1 3632440..3632559(+) (phrF) [Bacillus subtilis subsp. subtilis strain ONU 559]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=475926 H8S71_RS18555 WP_009968329.1 3632440..3632559(+) (phrF) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487