Detailed information NTG0475862

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: JS609_RS13755
• Genome accession: NZ_CP071043
• Coordinates: 2661702..2662307 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis isolate ELA2001105
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2656702..2667307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JS609_RS13725 (JS609_02697)	-	2657515..2657904 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
JS609_RS13730 (JS609_02698)	yajC	2657961..2658227 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
JS609_RS13735 (JS609_02699)	tgt	2658264..2659409 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
JS609_RS13740 (JS609_02700)	queA	2659436..2660464 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
JS609_RS13745 (JS609_02701)	yrzS	2660494..2660694 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
JS609_RS13750 (JS609_02702)	ruvB	2660687..2661691 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
JS609_RS13755 (JS609_02703)	ruvA	2661702..2662307 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
JS609_RS13760 (JS609_02704)	bofC	2662446..2662958 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
JS609_RS13765 (JS609_02705)	csbX	2663006..2664313 (-)	1308	WP_003246197.1	MFS transporter	-
JS609_RS13770 (JS609_02706)	iolG	2664384..2665408 (-)	1025	Protein_2672	inositol 2-dehydrogenase	-
JS609_RS13775 (JS609_02707)	yrzF	2665646..2666293 (+)	648	WP_003246159.1	phosphotransferase	-
JS609_RS13780 (JS609_02708)	-	2666339..2666461 (-)	123	WP_003229707.1	hypothetical protein	-
JS609_RS13785 (JS609_02709)	-	2666624..2666992 (+)	369	WP_224912982.1	DUF5412 family protein	-
JS609_RS13790	-	2666999..2667139 (+)	141	WP_029727127.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=475862 JS609_RS13755 WP_003229717.1 2661702..2662307(-) (ruvA) [Bacillus subtilis isolate ELA2001105]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=475862 JS609_RS13755 WP_003229717.1 2661702..2662307(-) (ruvA) [Bacillus subtilis isolate ELA2001105]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCCTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATTCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAAAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408