Detailed information NTG0475807

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: H8N02_RS05180
• Genome accession: NZ_CP060413
• Coordinates: 1115734..1116888 (-)
• Length: 384 a.a.
• NCBI ID: WP_210607317.1
• Uniprot ID: -
• Organism: Comamonas kerstersii strain 3132976
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1110734..1121888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8N02_RS05160 (H8N02_05160)	rpoH	1110887..1111831 (-)	945	WP_054065738.1	RNA polymerase sigma factor RpoH	-
H8N02_RS05165 (H8N02_05165)	-	1112129..1114063 (+)	1935	WP_151042189.1	FUSC family protein	-
H8N02_RS05170 (H8N02_05170)	-	1114101..1115000 (+)	900	WP_054065736.1	DMT family transporter	-
H8N02_RS05175 (H8N02_05175)	cutA	1115305..1115655 (+)	351	WP_151042185.1	divalent-cation tolerance protein CutA	-
H8N02_RS05180 (H8N02_05180)	pilA	1115734..1116888 (-)	1155	WP_210607317.1	signal recognition particle-docking protein FtsY	Machinery gene
H8N02_RS05185 (H8N02_05185)	-	1116916..1118367 (+)	1452	WP_210607318.1	M16 family metallopeptidase	-
H8N02_RS05190 (H8N02_05190)	-	1118376..1119728 (+)	1353	WP_210607319.1	M16 family metallopeptidase	-
H8N02_RS05195 (H8N02_05195)	rsmD	1119728..1120453 (+)	726	WP_210607320.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
H8N02_RS05200 (H8N02_05200)	coaD	1120579..1121070 (+)	492	WP_210607321.1	pantetheine-phosphate adenylyltransferase	-
H8N02_RS05205 (H8N02_05205)	-	1121204..1121524 (-)	321	WP_054065591.1	BON domain-containing protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40506.13 Da
• Isoelectric Point: 5.3160

>NTDB_id=475807 H8N02_RS05180 WP_210607317.1 1115734..1116888(-) (pilA) [Comamonas kerstersii strain 3132976]
MFSFFKKKAPSADTTPALEQAENVASTTSAPQAEDSSTPAAKTASVGGWLRNTFGISGKEEVPSSPAPEAFEAAPEPQAK
PTLPADRGSWMDRLKAGLRKTGTSITSVFTGTKIDDALYEELEDALLMADTGVKATMYLLEDLKRRVKETKTTDPAAVKA
LLADALADLLQPLEKPLTIGEHTPTVIMVAGVNGAGKTTSIGKLTKHLADNNQSVLLAAADTFRAAAREQLGVWATRNTV
EIISQTGGDPAAVSFDAVSAGKARKKDVVLVDTAGRLPTQLHLMEELKKIKRVVTKADDSAPHEVLLVIDGNTGQNALHQ
VKAFDDALGLTGLIVTKLDGTAKGGVLAAIAQEHAIPVYFVGVGEKLEDLETFNAKEFAQALLA

Nucleotide

• Length: 1155 bp

>NTDB_id=475807 H8N02_RS05180 WP_210607317.1 1115734..1116888(-) (pilA) [Comamonas kerstersii strain 3132976]
ATGTTCAGTTTTTTCAAGAAAAAAGCCCCATCTGCCGACACCACGCCTGCGCTTGAGCAGGCTGAGAACGTCGCATCTAC
GACCTCTGCCCCCCAGGCCGAGGACAGTTCCACCCCTGCAGCCAAGACAGCTTCTGTCGGCGGCTGGCTTCGCAATACCT
TCGGAATAAGCGGCAAGGAAGAAGTTCCTTCCAGCCCTGCGCCCGAAGCCTTTGAGGCAGCACCAGAACCCCAGGCCAAG
CCCACACTGCCTGCCGACCGTGGCAGCTGGATGGACCGCCTCAAAGCGGGGCTGCGCAAGACCGGCACCAGCATTACCTC
CGTATTCACGGGCACCAAGATTGATGATGCCCTGTACGAAGAGCTGGAAGACGCACTGCTCATGGCCGATACCGGTGTCA
AAGCCACCATGTATCTGCTCGAAGACCTCAAGCGCCGCGTCAAGGAAACCAAGACCACCGATCCAGCTGCCGTCAAGGCA
CTGCTGGCCGATGCCCTGGCTGACCTGCTGCAGCCGCTGGAAAAGCCGCTGACCATCGGCGAGCACACGCCCACCGTCAT
CATGGTGGCCGGCGTGAACGGCGCAGGTAAGACAACATCGATTGGCAAGCTCACCAAGCACCTGGCGGACAACAACCAGT
CTGTGCTGCTGGCCGCAGCCGACACCTTCCGCGCTGCTGCCCGCGAACAGCTGGGCGTATGGGCCACCCGCAATACCGTG
GAAATCATCAGCCAGACCGGGGGCGACCCCGCTGCCGTGAGCTTTGACGCCGTGAGCGCAGGCAAGGCACGCAAGAAGGA
CGTCGTGCTGGTCGACACTGCAGGCCGCCTGCCTACGCAGCTGCACCTGATGGAAGAGCTCAAGAAGATCAAGCGCGTGG
TCACCAAGGCCGATGACTCTGCTCCTCACGAAGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGCACCAG
GTCAAGGCCTTTGATGATGCCCTGGGCCTGACCGGTCTGATCGTGACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGCT
GGCCGCGATTGCGCAGGAGCACGCCATTCCCGTGTACTTCGTCGGCGTGGGCGAAAAGCTGGAAGATCTGGAAACCTTCA
ACGCCAAGGAGTTTGCCCAGGCGCTGCTGGCCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (184-383)

• SRP54-type protein, helical bundle domain (SRP54_N) (102-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.642	100	0.542