Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   H7X63_RS15625 Genome accession   NZ_CP060285
Coordinates   3269309..3269719 (-) Length   136 a.a.
NCBI ID   WP_002017231.1    Uniprot ID   N9KEH5
Organism   Acinetobacter baumannii strain XYAB2018     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3264309..3274719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7X63_RS15595 - 3264395..3264664 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  H7X63_RS15600 rapZ 3264661..3265512 (-) 852 WP_186338471.1 RNase adapter RapZ -
  H7X63_RS15605 panC 3265535..3266383 (-) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  H7X63_RS15610 panB 3266387..3267196 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  H7X63_RS15615 folK 3267242..3267724 (-) 483 WP_000219213.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  H7X63_RS15620 pcnB 3267721..3269184 (-) 1464 WP_001194207.1 polynucleotide adenylyltransferase PcnB -
  H7X63_RS15625 comEA 3269309..3269719 (-) 411 WP_002017231.1 ComEA family DNA-binding protein Machinery gene
  H7X63_RS15630 mazG 3269688..3270494 (-) 807 WP_000359483.1 nucleoside triphosphate pyrophosphohydrolase -
  H7X63_RS15635 - 3270606..3271379 (+) 774 WP_000682841.1 SDR family oxidoreductase -
  H7X63_RS15640 - 3271424..3273730 (-) 2307 WP_000259109.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15654.89 Da        Isoelectric Point: 10.3828

>NTDB_id=475286 H7X63_RS15625 WP_002017231.1 3269309..3269719(-) (comEA) [Acinetobacter baumannii strain XYAB2018]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=475286 H7X63_RS15625 WP_002017231.1 3269309..3269719(-) (comEA) [Acinetobacter baumannii strain XYAB2018]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KEH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.794

100

0.978
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412