Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H7F27_RS18795 Genome accession   NZ_CP060193
Coordinates   3710328..3711278 (-) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus sp. PAMC26543     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3705328..3716278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS18775 (H7F27_18775) - 3706195..3707613 (+) 1419 WP_185848282.1 MDR family MFS transporter -
  H7F27_RS18780 (H7F27_18780) - 3707661..3708614 (-) 954 WP_024120219.1 siderophore ABC transporter substrate-binding protein -
  H7F27_RS18785 (H7F27_18785) yclP 3708636..3709394 (-) 759 WP_095714087.1 petrobactin ABC transporter ATP-binding protein YclP -
  H7F27_RS18790 (H7F27_18790) yclO 3709388..3710335 (-) 948 WP_024120217.1 petrobactin ABC transporter permease YclO -
  H7F27_RS18795 (H7F27_18795) ceuB 3710328..3711278 (-) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  H7F27_RS18800 (H7F27_18800) - 3711664..3713028 (+) 1365 WP_185848283.1 aspartate kinase -
  H7F27_RS18805 (H7F27_18805) - 3713179..3713289 (+) 111 WP_024120215.1 YjcZ family sporulation protein -
  H7F27_RS18810 (H7F27_18810) - 3713436..3713528 (+) 93 WP_024120214.1 YjcZ family sporulation protein -
  H7F27_RS18815 (H7F27_18815) phrC 3713633..3713755 (-) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  H7F27_RS18820 (H7F27_18820) rapC 3713739..3714887 (-) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=474537 H7F27_RS18795 WP_010333025.1 3710328..3711278(-) (ceuB) [Bacillus sp. PAMC26543]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=474537 H7F27_RS18795 WP_010333025.1 3710328..3711278(-) (ceuB) [Bacillus sp. PAMC26543]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCACC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTAA
TCGCGGGCATGAGCATGAGCATCTGCGGGCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTAGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATCTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538