Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | H7F27_RS08655 | Genome accession | NZ_CP060193 |
| Coordinates | 1705060..1706130 (+) | Length | 356 a.a. |
| NCBI ID | WP_095713275.1 | Uniprot ID | - |
| Organism | Bacillus sp. PAMC26543 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1700060..1711130
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7F27_RS08625 (H7F27_08625) | mgsR | 1700308..1700688 (+) | 381 | WP_026014741.1 | transcriptional regulator MgsR | - |
| H7F27_RS08635 (H7F27_08635) | - | 1700920..1701759 (+) | 840 | WP_185848824.1 | STAS domain-containing protein | - |
| H7F27_RS08640 (H7F27_08640) | - | 1701839..1703168 (-) | 1330 | Protein_1693 | hemolysin family protein | - |
| H7F27_RS08645 (H7F27_08645) | - | 1703312..1704265 (+) | 954 | WP_185848826.1 | magnesium transporter CorA family protein | - |
| H7F27_RS08650 (H7F27_08650) | - | 1704328..1704738 (+) | 411 | WP_185848827.1 | CBS domain-containing protein | - |
| H7F27_RS08655 (H7F27_08655) | comGA | 1705060..1706130 (+) | 1071 | WP_095713275.1 | competence protein ComGA | Machinery gene |
| H7F27_RS08660 (H7F27_08660) | comGB | 1706117..1707154 (+) | 1038 | WP_185848828.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| H7F27_RS08665 (H7F27_08665) | comGC | 1707168..1707464 (+) | 297 | WP_010334925.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| H7F27_RS08670 (H7F27_08670) | comGD | 1707454..1707885 (+) | 432 | WP_151175143.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| H7F27_RS08675 (H7F27_08675) | comGE | 1707869..1708216 (+) | 348 | WP_185848829.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| H7F27_RS08680 (H7F27_08680) | comGF | 1708242..1708625 (+) | 384 | WP_038954226.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| H7F27_RS08685 (H7F27_08685) | comGG | 1708626..1709000 (+) | 375 | WP_185848830.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| H7F27_RS08690 (H7F27_08690) | - | 1709072..1709251 (+) | 180 | WP_003236949.1 | YqzE family protein | - |
| H7F27_RS08695 (H7F27_08695) | - | 1709293..1709616 (-) | 324 | WP_024122040.1 | YqzG/YhdC family protein | - |
| H7F27_RS08700 (H7F27_08700) | tapA | 1709893..1710654 (+) | 762 | WP_185848831.1 | amyloid fiber anchoring/assembly protein TapA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40480.69 Da Isoelectric Point: 8.8394
>NTDB_id=474499 H7F27_RS08655 WP_095713275.1 1705060..1706130(+) (comGA) [Bacillus sp. PAMC26543]
MDSIEKISKTLIEEAYRTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGDVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLIQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAQIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCEDGCSSVYCRLSRNVRRASVYELLYGKNLQQCIQEAKGD
NANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
MDSIEKISKTLIEEAYRTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGDVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLIQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAQIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCEDGCSSVYCRLSRNVRRASVYELLYGKNLQQCIQEAKGD
NANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
Nucleotide
Download Length: 1071 bp
>NTDB_id=474499 H7F27_RS08655 WP_095713275.1 1705060..1706130(+) (comGA) [Bacillus sp. PAMC26543]
TTGGATTCGATAGAAAAAATAAGCAAAACTTTAATTGAAGAGGCATATAGGACGAAGGCCTCTGACATTCACATTGTGCC
GAGGGAACGGGACGCAATCATTCATTTTCGGGTTGACCATGCATTGCTGAAAAAGCGAAACATGAAAAAAGAAGAGTGTG
TAAGACTCATTTCTCATTTTAAGTTTCTCTCAGCTATGGACATAGGGGAAAGAAGAAAGCCGCAAAATGGATCTCTTACT
CTAAAATTAAAAGAGGGTGACGTTCACTTAAGGATGTCAACGCTCCCGACAATTAACGAAGAAAGCCTCGTCATCAGAGT
GATGCCTCAGTATAATATCCCTTCGATTGACAAACTGTCTTTATTCCCAAAGACAGGAGCCACCTTGCTATCATTTTTAA
AACACTCCCACGGCATGCTGATTTTTACCGGACCAACAGGCTCTGGGAAAACAACAACATTATATTCTCTGATCCAATAT
GCAAAAAAACATTTTAATCGAAACATTGTCACACTTGAAGATCCAGTGGAAACGAGGGATGAAGATGTTCTTCAAGTGCA
GGTGAATGAAAAAGCCGGTGTCACATATTCCACAGGGCTGAAGGCTATTTTGCGCCATGACCCCGATATGATCATCTTAG
GTGAGATTAGAGACGCTGAAACAGCCCAAATTGCGGTGCGGGCAGCGATGACTGGTCATTTAGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTTGGCATTAATATGAATGAAATCGAGCAAACGGTTATTGC
GATAGCGGCTCAGCGTTTAGTTGATTTGGCTTGCCCGTTTTGTGAAGACGGATGTTCATCAGTGTATTGCCGCCTGTCAC
GAAATGTCAGGAGAGCAAGCGTATACGAGCTGCTTTACGGGAAAAACCTTCAGCAGTGTATCCAGGAAGCGAAAGGGGAC
AATGCAAATTACCAATATCAAACGCTGCGTCAAATTATAAGAAAAGGGATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
TTGGATTCGATAGAAAAAATAAGCAAAACTTTAATTGAAGAGGCATATAGGACGAAGGCCTCTGACATTCACATTGTGCC
GAGGGAACGGGACGCAATCATTCATTTTCGGGTTGACCATGCATTGCTGAAAAAGCGAAACATGAAAAAAGAAGAGTGTG
TAAGACTCATTTCTCATTTTAAGTTTCTCTCAGCTATGGACATAGGGGAAAGAAGAAAGCCGCAAAATGGATCTCTTACT
CTAAAATTAAAAGAGGGTGACGTTCACTTAAGGATGTCAACGCTCCCGACAATTAACGAAGAAAGCCTCGTCATCAGAGT
GATGCCTCAGTATAATATCCCTTCGATTGACAAACTGTCTTTATTCCCAAAGACAGGAGCCACCTTGCTATCATTTTTAA
AACACTCCCACGGCATGCTGATTTTTACCGGACCAACAGGCTCTGGGAAAACAACAACATTATATTCTCTGATCCAATAT
GCAAAAAAACATTTTAATCGAAACATTGTCACACTTGAAGATCCAGTGGAAACGAGGGATGAAGATGTTCTTCAAGTGCA
GGTGAATGAAAAAGCCGGTGTCACATATTCCACAGGGCTGAAGGCTATTTTGCGCCATGACCCCGATATGATCATCTTAG
GTGAGATTAGAGACGCTGAAACAGCCCAAATTGCGGTGCGGGCAGCGATGACTGGTCATTTAGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTTGGCATTAATATGAATGAAATCGAGCAAACGGTTATTGC
GATAGCGGCTCAGCGTTTAGTTGATTTGGCTTGCCCGTTTTGTGAAGACGGATGTTCATCAGTGTATTGCCGCCTGTCAC
GAAATGTCAGGAGAGCAAGCGTATACGAGCTGCTTTACGGGAAAAACCTTCAGCAGTGTATCCAGGAAGCGAAAGGGGAC
AATGCAAATTACCAATATCAAACGCTGCGTCAAATTATAAGAAAAGGGATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
96.067 |
100 |
0.961 |