Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   JWY35_RS16275 Genome accession   NZ_CP070485
Coordinates   3031097..3031960 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain JNFE1126     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3026097..3036960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JWY35_RS16240 (JWY35_16095) mrpE 3026265..3026741 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  JWY35_RS16245 (JWY35_16100) mrpF 3026741..3027025 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JWY35_RS16250 (JWY35_16105) mnhG 3027009..3027383 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  JWY35_RS16255 (JWY35_16110) yuxO 3027422..3027802 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  JWY35_RS16260 (JWY35_16115) comA 3027821..3028465 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JWY35_RS16265 (JWY35_16120) comP 3028546..3030858 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  JWY35_RS16270 (JWY35_16125) comX 3030874..3031095 (-) 222 WP_014480704.1 competence pheromone ComX -
  JWY35_RS16275 (JWY35_16130) comQ 3031097..3031960 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  JWY35_RS16280 (JWY35_16135) degQ 3032145..3032285 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JWY35_RS16285 (JWY35_16140) - 3032507..3032632 (+) 126 WP_003228793.1 hypothetical protein -
  JWY35_RS16290 (JWY35_16145) - 3032746..3033114 (+) 369 WP_014477834.1 hypothetical protein -
  JWY35_RS16295 (JWY35_16150) pdeH 3033090..3034319 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  JWY35_RS16300 (JWY35_16155) pncB 3034455..3035927 (-) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  JWY35_RS16305 (JWY35_16160) pncA 3035943..3036494 (-) 552 WP_014480709.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=474503 JWY35_RS16275 WP_014480705.1 3031097..3031960(-) (comQ) [Bacillus subtilis strain JNFE1126]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=474503 JWY35_RS16275 WP_014480705.1 3031097..3031960(-) (comQ) [Bacillus subtilis strain JNFE1126]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439