Detailed information NTG0474489

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: JWY35_RS14125
• Genome accession: NZ_CP070485
• Coordinates: 2608309..2608914 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain JNFE1126
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2603309..2613914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWY35_RS14095 (JWY35_13965)	-	2604122..2604511 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
JWY35_RS14100 (JWY35_13970)	yajC	2604568..2604834 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
JWY35_RS14105 (JWY35_13975)	tgt	2604871..2606016 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
JWY35_RS14110 (JWY35_13980)	queA	2606043..2607071 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
JWY35_RS14115 (JWY35_13985)	yrzS	2607101..2607301 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
JWY35_RS14120 (JWY35_13990)	ruvB	2607294..2608298 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
JWY35_RS14125 (JWY35_13995)	ruvA	2608309..2608914 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
JWY35_RS14130 (JWY35_14000)	bofC	2609053..2609565 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
JWY35_RS14135 (JWY35_14005)	csbX	2609613..2610920 (-)	1308	WP_014480439.1	MFS transporter	-
JWY35_RS14140 (JWY35_14010)	iolG	2610991..2612016 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
JWY35_RS14145 (JWY35_14015)	yrzF	2612254..2612901 (+)	648	WP_014480441.1	phosphotransferase	-
JWY35_RS14150 (JWY35_14020)	-	2612947..2613069 (-)	123	WP_003229707.1	hypothetical protein	-
JWY35_RS14160 (JWY35_14025)	-	2613232..2613600 (+)	369	WP_186437837.1	DUF5412 family protein	-
JWY35_RS14165 (JWY35_14030)	-	2613607..2613747 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=474489 JWY35_RS14125 WP_003229717.1 2608309..2608914(-) (ruvA) [Bacillus subtilis strain JNFE1126]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=474489 JWY35_RS14125 WP_003229717.1 2608309..2608914(-) (ruvA) [Bacillus subtilis strain JNFE1126]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408