Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   H7F27_RS05190 Genome accession   NZ_CP060193
Coordinates   1051046..1053352 (+) Length   768 a.a.
NCBI ID   WP_185848673.1    Uniprot ID   -
Organism   Bacillus sp. PAMC26543     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1046046..1058352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS05165 (H7F27_05165) - 1047584..1048813 (+) 1230 WP_024122685.1 EAL and HDOD domain-containing protein -
  H7F27_RS05170 (H7F27_05170) - 1048789..1049157 (-) 369 WP_024122684.1 hypothetical protein -
  H7F27_RS05175 (H7F27_05175) degQ 1049618..1049758 (+) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  H7F27_RS05180 (H7F27_05180) - 1049943..1050812 (+) 870 WP_101864136.1 polyprenyl synthetase family protein -
  H7F27_RS05185 (H7F27_05185) comX 1050809..1051030 (+) 222 WP_059292642.1 competence pheromone ComX -
  H7F27_RS05190 (H7F27_05190) comP 1051046..1053352 (+) 2307 WP_185848673.1 histidine kinase Regulator
  H7F27_RS05195 (H7F27_05195) comA 1053433..1054077 (+) 645 WP_101864137.1 two-component system response regulator ComA Regulator
  H7F27_RS05200 (H7F27_05200) - 1054095..1054475 (+) 381 WP_024122679.1 hotdog fold thioesterase -
  H7F27_RS05205 (H7F27_05205) mnhG 1054514..1054888 (-) 375 WP_185848674.1 monovalent cation/H(+) antiporter subunit G -
  H7F27_RS05210 (H7F27_05210) - 1054872..1055156 (-) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  H7F27_RS05215 (H7F27_05215) - 1055156..1055632 (-) 477 WP_185848675.1 Na+/H+ antiporter subunit E -
  H7F27_RS05220 (H7F27_05220) - 1055638..1057119 (-) 1482 WP_103671366.1 Na+/H+ antiporter subunit D -
  H7F27_RS05225 (H7F27_05225) - 1057112..1057453 (-) 342 WP_095713974.1 Na(+)/H(+) antiporter subunit C -
  H7F27_RS05230 (H7F27_05230) - 1057453..1057884 (-) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89269.34 Da        Isoelectric Point: 8.0083

>NTDB_id=474485 H7F27_RS05190 WP_185848673.1 1051046..1053352(+) (comP) [Bacillus sp. PAMC26543]
MHINNNVYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYEYYSGVKKGDIILEVNGQRGSEIQ
LESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSSSAFVLILFLLFVSVAY
VSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSNLN
LISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVYQF
MTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPDDNFYYVKLTFVIYLLMFAVFYFKEIIDFRFKLKRFTEKFN
YQDGIFKFTQLIKQASSVDQVLNYFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKIKE
FKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKLMY
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDL
GLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGV
GFDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=474485 H7F27_RS05190 WP_185848673.1 1051046..1053352(+) (comP) [Bacillus sp. PAMC26543]
ATGCACATAAATAATAACGTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCAGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATGAATATTATTCAGGTGTAAAAAAAGGTGACATCATTCTTGAAGTGAATGGGCAAAGAGGAAGCGAAATCCAG
TTAGAGAGCGGAAGATTGGTCAATGTAGAAAGCTTAACTGTTGAGAGAGATAATAAATCATTTCATTTACAAAATGTAAG
CCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCACTCATATCTTATTCAATCTGTTTATTTTGTATATTTTTTG
TTTACAGAATAAATAAAGTAAGAAAATCATCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTAGCATAT
GTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTACCTGCTTGTCCTTACTTTAGTAAGTTGTCCAATTTT
ATATATACATTTCATATATAAATACTTTGCGGAATTGGGCACTAAGTTATTCAAAAAGAAGATTTTAATCATAATGTATA
TACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCTAACTTGAAC
TTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATCCTTATCCATCAAGGGATTAGAAAAATCAAACAAAATGAGCA
AAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCCTTTATTATCTTTTTTGTTATTCCCTATG
TGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTGTATCAATTT
ATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACCTACTGT
TATTGTGGTCACCATATTTAATTACATTCAAAAACCAGATGATAACTTTTACTACGTTAAACTAACATTTGTAATATATT
TGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAATTTAAT
TATCAAGATGGAATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATTACTTTAAAAA
TACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTAGTAAGA
ACAACTTTAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATTAAAGAG
TTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTATAATAC
TTTTAAATTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACGTTATGA
AAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCGGTATGGCTCAAAAAACTTATGTAC
ACCATCGAAGAAAAACAACGTTCTGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAAACG
GCAGTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGTCGTGAAGAGGTGCAGGACAAGCTCGTACAGA
TGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTG
GGACTGGTGAAGGCGCTGTCTAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAG
ATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAATGCAGTGAAAC
ACTCTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGACGATGGTGTC
GGATTTGATCTAGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGA
TGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.397

100

0.555