Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   H7F27_RS05175 Genome accession   NZ_CP060193
Coordinates   1049618..1049758 (+) Length   46 a.a.
NCBI ID   WP_024122683.1    Uniprot ID   A0A9Q4HP57
Organism   Bacillus sp. PAMC26543     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1044618..1054758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS05150 (H7F27_05150) - 1044955..1045314 (+) 360 WP_395958026.1 YueI family protein -
  H7F27_RS05155 (H7F27_05155) - 1045411..1045963 (+) 553 Protein_1019 cysteine hydrolase family protein -
  H7F27_RS05160 (H7F27_05160) - 1045979..1047448 (+) 1470 WP_024122686.1 nicotinate phosphoribosyltransferase -
  H7F27_RS05165 (H7F27_05165) - 1047584..1048813 (+) 1230 WP_024122685.1 EAL and HDOD domain-containing protein -
  H7F27_RS05170 (H7F27_05170) - 1048789..1049157 (-) 369 WP_024122684.1 hypothetical protein -
  H7F27_RS05175 (H7F27_05175) degQ 1049618..1049758 (+) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  H7F27_RS05180 (H7F27_05180) - 1049943..1050812 (+) 870 WP_101864136.1 polyprenyl synthetase family protein -
  H7F27_RS05185 (H7F27_05185) comX 1050809..1051030 (+) 222 WP_059292642.1 competence pheromone ComX -
  H7F27_RS05190 (H7F27_05190) comP 1051046..1053352 (+) 2307 WP_185848673.1 histidine kinase Regulator
  H7F27_RS05195 (H7F27_05195) comA 1053433..1054077 (+) 645 WP_101864137.1 two-component system response regulator ComA Regulator
  H7F27_RS05200 (H7F27_05200) - 1054095..1054475 (+) 381 WP_024122679.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5533.44 Da        Isoelectric Point: 6.2559

>NTDB_id=474484 H7F27_RS05175 WP_024122683.1 1049618..1049758(+) (degQ) [Bacillus sp. PAMC26543]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYTYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=474484 H7F27_RS05175 WP_024122683.1 1049618..1049758(+) (degQ) [Bacillus sp. PAMC26543]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATACACATATGCAATGAAAATTTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978