Detailed information NTG0474486

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: JWY35_RS14010
• Genome accession: NZ_CP070485
• Coordinates: 2584482..2585747 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JNFE1126
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2579482..2590747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWY35_RS13990 (JWY35_13860)	yrrB	2580853..2581473 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
JWY35_RS13995 (JWY35_13865)	mnmA	2581559..2582674 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
JWY35_RS14000 (JWY35_13870)	iscSA	2582705..2583844 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
JWY35_RS14005 (JWY35_13875)	cymR	2583863..2584279 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
JWY35_RS14010 (JWY35_13880)	rarA	2584482..2585747 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
JWY35_RS14015 (JWY35_13885)	tcdA	2585787..2586551 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
JWY35_RS14025 (JWY35_13895)	aspS	2586886..2588664 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
JWY35_RS14030 (JWY35_13900)	hisS	2588678..2589952 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
JWY35_RS14035 (JWY35_13905)	yrzK	2590334..2590504 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=474486 JWY35_RS14010 WP_014480427.1 2584482..2585747(+) (rarA) [Bacillus subtilis strain JNFE1126]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=474486 JWY35_RS14010 WP_014480427.1 2584482..2585747(+) (rarA) [Bacillus subtilis strain JNFE1126]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993