Detailed information NTG0474383

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: H7F25_RS15080
• Genome accession: NZ_CP060191
• Coordinates: 2964598..2965773 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. PAMC28571
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2959598..2970773

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7F25_RS15050 (H7F25_15050)	-	2959766..2960185 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
H7F25_RS15055 (H7F25_15055)	comFC	2960243..2960899 (-)	657	WP_253207496.1	ComF family protein	Machinery gene
H7F25_RS15060 (H7F25_15060)	-	2960926..2961219 (-)	294	WP_024423623.1	late competence development ComFB family protein	-
H7F25_RS15065 (H7F25_15065)	comFA	2961268..2962665 (-)	1398	WP_142927723.1	DEAD/DEAH box helicase	Machinery gene
H7F25_RS15070 (H7F25_15070)	-	2962786..2963628 (-)	843	WP_024423625.1	DegV family protein	-
H7F25_RS15075 (H7F25_15075)	degU	2963844..2964533 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
H7F25_RS15080 (H7F25_15080)	degS	2964598..2965773 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
H7F25_RS15085 (H7F25_15085)	-	2965994..2966662 (+)	669	WP_012011434.1	YigZ family protein	-
H7F25_RS15090 (H7F25_15090)	-	2966647..2967738 (+)	1092	WP_024423626.1	LCP family protein	-
H7F25_RS15095 (H7F25_15095)	-	2967774..2968841 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
H7F25_RS15100 (H7F25_15100)	tuaH	2968976..2970172 (-)	1197	WP_041108506.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=474383 H7F25_RS15080 WP_003213166.1 2964598..2965773(-) (degS) [Bacillus sp. PAMC28571]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=474383 H7F25_RS15080 WP_003213166.1 2964598..2965773(-) (degS) [Bacillus sp. PAMC28571]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACCCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841