Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   H7F25_RS13385 Genome accession   NZ_CP060191
Coordinates   2628401..2630713 (-) Length   770 a.a.
NCBI ID   WP_024423323.1    Uniprot ID   -
Organism   Bacillus sp. PAMC28571     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2623401..2635713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F25_RS13345 (H7F25_13345) - 2623805..2624236 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  H7F25_RS13350 (H7F25_13350) - 2624236..2624577 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  H7F25_RS13355 (H7F25_13355) - 2624570..2626048 (+) 1479 WP_024423317.1 Na+/H+ antiporter subunit D -
  H7F25_RS13360 (H7F25_13360) - 2626055..2626534 (+) 480 WP_024423318.1 Na+/H+ antiporter subunit E -
  H7F25_RS13365 (H7F25_13365) - 2626534..2626815 (+) 282 WP_024423319.1 Na(+)/H(+) antiporter subunit F1 -
  H7F25_RS13370 (H7F25_13370) mnhG 2626799..2627173 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  H7F25_RS13375 (H7F25_13375) - 2627266..2627655 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  H7F25_RS13380 (H7F25_13380) comA 2627679..2628320 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  H7F25_RS13385 (H7F25_13385) comP 2628401..2630713 (-) 2313 WP_024423323.1 ATP-binding protein Regulator
  H7F25_RS13390 (H7F25_13390) comX 2630767..2630937 (-) 171 WP_073207246.1 competence pheromone ComX -
  H7F25_RS13395 (H7F25_13395) - 2630934..2631848 (-) 915 WP_024423324.1 polyprenyl synthetase family protein -
  H7F25_RS13400 (H7F25_13400) degQ 2632000..2632140 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  H7F25_RS13405 (H7F25_13405) - 2632646..2633002 (+) 357 WP_024423325.1 hypothetical protein -
  H7F25_RS13410 (H7F25_13410) - 2633038..2634264 (-) 1227 WP_024423326.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89478.05 Da        Isoelectric Point: 7.5085

>NTDB_id=474375 H7F25_RS13385 WP_024423323.1 2628401..2630713(-) (comP) [Bacillus sp. PAMC28571]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEAQRKSAFLLVVFLLTICIGY
LSAGTSGIGERFSHYVITFCLSSVFVFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLIGRLKYYGFLAITPTVFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFIICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=474375 H7F25_RS13385 WP_024423323.1 2628401..2630713(-) (comP) [Bacillus sp. PAMC28571]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTAGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAGTATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCCCAACGAAAATCAGCATTTCTTTTAGTTGTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAAAGATTTAGCCATTATGTAATTACATTTTGTTTATCAAGTGTATTTGTCTT
TTATATTCATTTCATTTATCAGTATTTCAAAGAGTTTGACCTGCATATAACGACTCAAAAAACAATTCGCTTTTTATATA
GTCTTCCTATAATTAATCTAGTAATAGAGTTATTTGTTCCGATTGATTCAGCGATAGCCAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAATATCATAGCATTTTGTCCATTTATCTTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTGGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTTATGACGAACAAGCTTTACAATATGGATTTTTTGATAGGCAGACTGAAATACTATGGGTTTCTTGCCATTACACCGAC
CGTTTTTGTTGTTGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACCT
ATACACTCATGTTGGCTGTATTCTATTTCAAAGAAATTCTAGATTTCCGCTTCCGTCTGAAGCGTTTTTCAGAAAAGCAT
AATTACCAGGACAGTGTGTTTAAATTCACGCAGCTCATTCGTGAGGCGTCCTCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTGAATAAAGCCTTTGTGCTTGAGGTGAAAGCTGACGGACAAATTATTGAAATTG
ATGAATCGACAAATGATAGTAAGCTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTCGGGAAAATT
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAACGGGGCGGTCACTCGTTTATCATTTGCTGCTTATCCAATAT
ACAGACACCGAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAAATTGAAGAGTTGATGGAGCATCTTGACGATTTGAAACAGCGTGAGGCCAATCCTGCCTGGCTGAAGAAAATC
ATGTTTGCTATGGAAGAAAAGCAGCGTTCAGATTTAGCGAGAGATCTTCATGATTCCGTGCTGCAGGACTTGATATCACT
AAAAAGGCAGTCGGAGATGTTTTTAACGAATTTCCAAAACAACCAATGCCCGACATCTATTGAAAATTCGCTTATCTCAT
GGAATGATCAAATGTCCAAAGTGATTCAAACGACGAGAGAAACGTGTCATGAGCTTCGCCCGCAGCTGCTGTATGATTTA
GGTTTAGTAAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCGCCGTTTCATATTAGGCTGAATACGACACG
CTTTGATAAAGAATTGGACATTGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAGCTGTTATCCAACGCCC
TGAAGCACTCAAAAGCCACTCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGAGTCGGTTTTGATGCCAGTCATCTTGATCAGCACACAATGAGCATGGGGCTATCGGGTATTAGAGAACGAGTGAAAGC
GTTAAATGGAAAGCTTCAAATTCACACAGCCCCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.774

100

0.491