Detailed information NTG0474086

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: GWQ54_RS32000
• Genome accession: NZ_CP070373
• Coordinates: 7235074..7236366 (-)
• Length: 430 a.a.
• NCBI ID: WP_161254410.1
• Uniprot ID: A0ABQ2ZQV7
• Organism: Streptomyces sp. MBT27
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7230074..7241366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GWQ54_RS31985	-	7230579..7231145 (+)	567	WP_167153173.1	vitamin K epoxide reductase family protein	-
GWQ54_RS31990	-	7231214..7233838 (-)	2625	WP_167153171.1	valine--tRNA ligase	-
GWQ54_RS31995	-	7233976..7234998 (+)	1023	WP_167153170.1	hypothetical protein	-
GWQ54_RS32000	clpX	7235074..7236366 (-)	1293	WP_161254410.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
GWQ54_RS32005	clpP	7236543..7237232 (-)	690	WP_161254412.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GWQ54_RS32010	-	7237278..7237886 (-)	609	WP_167156210.1	ATP-dependent Clp protease proteolytic subunit	-
GWQ54_RS32015	tig	7238142..7239518 (-)	1377	WP_167153168.1	trigger factor	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47070.92 Da
• Isoelectric Point: 4.8824

>NTDB_id=474086 GWQ54_RS32000 WP_161254410.1 7235074..7236366(-) (clpX) [Streptomyces sp. MBT27]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=474086 GWQ54_RS32000 WP_161254410.1 7235074..7236366(-) (clpX) [Streptomyces sp. MBT27]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGTCCT
CCGAGGTGCGGTGGGAAGAACTTCCCAAGCCGCGCGAGATCTACGAATTCCTTGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGACGGGCCG
GGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCGGGCAAGACGCTGCTCGCGCAGA
CCCTGGCGCGCATGCTCAACGTCCCGTTCGCGATCGCGGACGCCACCGCCCTCACCGAGGCCGGTTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTGAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGGGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGGCAAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGGCTCCCCGTGCTGACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCACGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGTGTCGTCATCACC
GCCGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGTGAGCCCCGCATCGTGAAGAACGACGGGCGGCACGA
GAAGAGCGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512