Detailed information NTG0473829

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: LLUL021_RS10800
• Genome accession: NZ_CP070263
• Coordinates: 2132418..2133494 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis subsp. lactis strain UL021
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2127418..2138494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUL021_RS10775 (LLUL021_10735)	pgsA	2127578..2128150 (-)	573	WP_004254763.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LLUL021_RS10780 (LLUL021_10740)	-	2128191..2129087 (-)	897	WP_004254758.1	RodZ family helix-turn-helix domain-containing protein	-
LLUL021_RS10785 (LLUL021_10745)	yfmH	2129299..2130582 (-)	1284	WP_004254752.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LLUL021_RS10790 (LLUL021_10750)	yfmF	2130572..2131858 (-)	1287	WP_021214872.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
LLUL021_RS10795 (LLUL021_10755)	yaaA	2132056..2132418 (+)	363	WP_004254746.1	S4 domain-containing protein YaaA	-
LLUL021_RS10800 (LLUL021_10760)	recF	2132418..2133494 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
LLUL021_RS10805 (LLUL021_10765)	-	2133581..2133949 (-)	369	WP_004254740.1	carboxymuconolactone decarboxylase family protein	-
LLUL021_RS10810 (LLUL021_10770)	-	2134027..2134404 (+)	378	WP_010906243.1	MerR family transcriptional regulator	-
LLUL021_RS10815 (LLUL021_10775)	-	2134417..2135238 (-)	822	WP_223203825.1	alpha/beta hydrolase	-
LLUL021_RS10820 (LLUL021_10780)	galE	2135484..2136464 (-)	981	WP_010906245.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=473829 LLUL021_RS10800 WP_010906242.1 2132418..2133494(+) (recF) [Lactococcus lactis subsp. lactis strain UL021]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=473829 LLUL021_RS10800 WP_010906242.1 2132418..2133494(+) (recF) [Lactococcus lactis subsp. lactis strain UL021]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCACCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCACAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447