Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   H5405_RS04690 Genome accession   NZ_CP060085
Coordinates   925827..928115 (+) Length   762 a.a.
NCBI ID   WP_007613431.1    Uniprot ID   -
Organism   Bacillus velezensis strain HAB-2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 920827..933115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H5405_RS04665 (H5405_04665) - 922411..923634 (+) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  H5405_RS04670 (H5405_04670) - 923641..923982 (-) 342 WP_007613435.1 hypothetical protein -
  H5405_RS04675 (H5405_04675) degQ 924448..924588 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  H5405_RS04680 (H5405_04680) - 924740..925651 (+) 912 WP_007613433.1 polyprenyl synthetase family protein -
  H5405_RS04685 (H5405_04685) comX 925651..925815 (+) 165 WP_007613432.1 competence pheromone ComX -
  H5405_RS04690 (H5405_04690) comP 925827..928115 (+) 2289 WP_007613431.1 histidine kinase Regulator
  H5405_RS04695 (H5405_04695) comA 928196..928840 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  H5405_RS04700 (H5405_04700) - 928862..929245 (+) 384 WP_007613430.1 hotdog fold thioesterase -
  H5405_RS04705 (H5405_04705) mnhG 929285..929659 (-) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  H5405_RS04710 (H5405_04710) - 929643..929927 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  H5405_RS04715 (H5405_04715) - 929927..930403 (-) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  H5405_RS04720 (H5405_04720) - 930409..931890 (-) 1482 WP_029326018.1 Na+/H+ antiporter subunit D -
  H5405_RS04725 (H5405_04725) - 931883..932224 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  H5405_RS04730 (H5405_04730) - 932224..932655 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 762 a.a.        Molecular weight: 88389.58 Da        Isoelectric Point: 7.3985

>NTDB_id=473778 H5405_RS04690 WP_007613431.1 925827..928115(+) (comP) [Bacillus velezensis strain HAB-2]
MKSKYNKVSVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTSTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTIEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2289 bp        

>NTDB_id=473778 H5405_RS04690 WP_007613431.1 925827..928115(+) (comP) [Bacillus velezensis strain HAB-2]
ATGAAGTCCAAGTACAATAAGGTTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATTA
AAATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCCTCAATTGCATATATTAGT
GCTGGAGGATCGGCAAAAGGCGATTTGCTTAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTCCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTATGGCTTTTTAGCGTTAACCTCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTATTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAA
GAAGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTTCGTGCGCTTGACGGACGAATGAAAATTGA
CACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.545