Detailed information NTG0473771

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: H5405_RS02770
• Genome accession: NZ_CP060085
• Coordinates: 550625..551788 (+)
• Length: 387 a.a.
• NCBI ID: WP_007614106.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain HAB-2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 545625..556788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H5405_RS02750 (H5405_02750)	-	546061..547257 (+)	1197	WP_007614112.1	glycosyltransferase	-
H5405_RS02755 (H5405_02755)	-	547390..548466 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
H5405_RS02760 (H5405_02760)	-	548569..549750 (-)	1182	WP_007614108.1	LCP family protein	-
H5405_RS02765 (H5405_02765)	-	549755..550402 (-)	648	WP_007614107.1	YigZ family protein	-
H5405_RS02770 (H5405_02770)	degS	550625..551788 (+)	1164	WP_007614106.1	two-component sensor histidine kinase DegS	Regulator
H5405_RS02775 (H5405_02775)	degU	551865..552554 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
H5405_RS02780 (H5405_02780)	-	552652..553500 (+)	849	WP_007614105.1	DegV family protein	-
H5405_RS02785 (H5405_02785)	comFA	553609..554994 (+)	1386	WP_007614104.1	DEAD/DEAH box helicase	Machinery gene
H5405_RS02790 (H5405_02790)	-	555052..555336 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
H5405_RS02795 (H5405_02795)	comFC	555342..556031 (+)	690	WP_200866785.1	phosphoribosyltransferase family protein	Machinery gene
H5405_RS02800 (H5405_02800)	-	556105..556524 (+)	420	WP_007614102.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.81 Da
• Isoelectric Point: 6.8616

>NTDB_id=473771 H5405_RS02770 WP_007614106.1 550625..551788(+) (degS) [Bacillus velezensis strain HAB-2]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEI
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=473771 H5405_RS02770 WP_007614106.1 550625..551788(+) (degS) [Bacillus velezensis strain HAB-2]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATACATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
TAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAATA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.844	99.483	0.953