Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H5715_RS17105 Genome accession   NZ_CP060084
Coordinates   4202163..4202558 (+) Length   131 a.a.
NCBI ID   WP_075186251.1    Uniprot ID   -
Organism   Teredinibacter haidensis strain Bs08     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4197163..4207558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H5715_RS17080 pilU 4197760..4198902 (+) 1143 WP_075186256.1 PilT/PilU family type 4a pilus ATPase Machinery gene
  H5715_RS17085 ruvX 4199015..4199440 (-) 426 WP_075186255.1 Holliday junction resolvase RuvX -
  H5715_RS17090 - 4199433..4200017 (-) 585 WP_075186254.1 YqgE/AlgH family protein -
  H5715_RS17095 - 4200083..4200961 (-) 879 WP_075186253.1 TonB family protein -
  H5715_RS17100 gshB 4200970..4201926 (-) 957 WP_075186252.1 glutathione synthase -
  H5715_RS17105 pilG 4202163..4202558 (+) 396 WP_075186251.1 twitching motility response regulator PilG Regulator
  H5715_RS17110 pilH 4202613..4202975 (+) 363 WP_075186250.1 twitching motility response regulator PilH -
  H5715_RS17115 - 4203050..4203589 (+) 540 WP_075186249.1 chemotaxis protein CheW -
  H5715_RS17120 - 4203757..4206015 (+) 2259 WP_075186248.1 methyl-accepting chemotaxis protein -
  H5715_RS17125 - 4206037..4206897 (+) 861 WP_075186247.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14358.78 Da        Isoelectric Point: 9.0957

>NTDB_id=473762 H5715_RS17105 WP_075186251.1 4202163..4202558(+) (pilG) [Teredinibacter haidensis strain Bs08]
MDVNLEHLKVMVIDDSKTIRRTAETLLKKVGCTVVTATDGFDALAKIADTRPNIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIEAHVKVARAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=473762 H5715_RS17105 WP_075186251.1 4202163..4202558(+) (pilG) [Teredinibacter haidensis strain Bs08]
ATGGACGTCAATTTAGAGCACTTGAAGGTGATGGTTATCGATGACAGTAAAACCATCCGTCGAACTGCTGAAACGCTATT
GAAAAAGGTGGGTTGCACGGTTGTGACTGCCACAGATGGCTTTGATGCCCTGGCAAAAATCGCCGATACCCGTCCTAATA
TTATTTTTGTTGATATTATGATGCCCCGCTTGGACGGCTACCAAACTTGCGCATTAATAAAAAATAACAGTGAATTCAAA
TCTACCCCCGTCATTATGCTCTCCAGTAAAGATGGCCTTTTTGATAAGGCGAAAGGGCGTATCGTGGGTTCAGACCAGTA
TCTAACCAAGCCATTCAGCAAGGGCGAGCTGATTGGTGCTATTGAAGCGCACGTAAAAGTCGCGCGAGCTAGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.8

95.42

0.695
  vicR Streptococcus mutans UA159

40.678

90.076

0.366