Detailed information NTG0472294

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: H4K32_RS10905
• Genome accession: NZ_CP059855
• Coordinates: 2104890..2106053 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Pm9
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2099890..2111053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4K32_RS10885	-	2100306..2101502 (+)	1197	WP_069013672.1	glycosyltransferase	-
H4K32_RS10890	-	2101635..2102711 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
H4K32_RS10895	-	2102801..2104015 (-)	1215	WP_014305930.1	LCP family protein	-
H4K32_RS10900	-	2104020..2104667 (-)	648	WP_003151384.1	YigZ family protein	-
H4K32_RS10905	degS	2104890..2106053 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
H4K32_RS10910	degU	2106130..2106819 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
H4K32_RS10915	-	2106917..2107765 (+)	849	WP_014305929.1	DegV family protein	-
H4K32_RS10920	comFA	2107873..2109258 (+)	1386	WP_063174504.1	DEAD/DEAH box helicase	Machinery gene
H4K32_RS10925	-	2109316..2109600 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
H4K32_RS10930	comFC	2109606..2110295 (+)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
H4K32_RS10935	-	2110369..2110788 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=472294 H4K32_RS10905 WP_003151385.1 2104890..2106053(+) (degS) [Bacillus velezensis strain Pm9]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=472294 H4K32_RS10905 WP_003151385.1 2104890..2106053(+) (degS) [Bacillus velezensis strain Pm9]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948