Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   CMOL_RS01460 Genome accession   NZ_CP059597
Coordinates   277491..278141 (-) Length   216 a.a.
NCBI ID   WP_200280130.1    Uniprot ID   -
Organism   Campylobacter sp. RM10537     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 272491..283141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CMOL_RS01430 (CMOL_0285) - 273332..274306 (+) 975 WP_239820445.1 hypothetical protein -
  CMOL_RS01435 (CMOL_0286) - 274303..275049 (+) 747 WP_200280118.1 TlyA family RNA methyltransferase -
  CMOL_RS01440 (CMOL_0287) - 275018..275863 (+) 846 WP_239820446.1 bifunctional riboflavin kinase/FAD synthetase -
  CMOL_RS01445 (CMOL_0288) cmoA 275860..276564 (+) 705 WP_200280124.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  CMOL_RS01450 (CMOL_0289) - 276567..276773 (-) 207 WP_200280298.1 EexN family lipoprotein -
  CMOL_RS01455 (CMOL_0290) - 276840..277481 (-) 642 WP_200280127.1 trimeric intracellular cation channel family protein -
  CMOL_RS01460 (CMOL_0291) CJE1441 277491..278141 (-) 651 WP_200280130.1 DNA/RNA non-specific endonuclease Regulator
  CMOL_RS01465 (CMOL_0292) nth 278141..278764 (-) 624 WP_200280133.1 endonuclease III -
  CMOL_RS01470 (CMOL_0293) - 278846..279667 (+) 822 WP_200280136.1 peptidylprolyl isomerase -
  CMOL_RS01475 (CMOL_0294) fbaA 279669..280733 (+) 1065 WP_239820741.1 class II fructose-bisphosphate aldolase -
  CMOL_RS01480 (CMOL_0295) - 280823..282241 (+) 1419 WP_239820447.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25554.35 Da        Isoelectric Point: 9.8582

>NTDB_id=471185 CMOL_RS01460 WP_200280130.1 277491..278141(-) (CJE1441) [Campylobacter sp. RM10537]
MKLLTLIFLCFFNAFALQSYIPNKDFSSYFNSFNCSQVLNKFFYINCYDYSLKGTKAVAYKVESSNLKMKQIKKRPRFED
DTNIPKKYRTTWSDYKHSGYTRGHTASNASFRFSKAAQNSVFLMSNMTPQNEQINAKIWNEIEQRERELALKFQSVEVLN
LVLYDKNPKRIKNNIAIPSFYVKIIQTPKFKECYQVPNHEVVDEKINHYKISCEQF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=471185 CMOL_RS01460 WP_200280130.1 277491..278141(-) (CJE1441) [Campylobacter sp. RM10537]
ATGAAATTACTCACTTTGATATTTTTGTGCTTTTTTAATGCATTTGCTCTTCAATCTTACATACCTAATAAAGATTTTTC
ATCCTATTTTAATTCTTTTAACTGTTCTCAAGTTTTAAATAAATTTTTTTATATCAATTGTTATGATTATTCTTTAAAGG
GCACAAAGGCAGTTGCTTACAAAGTTGAATCCTCTAATTTAAAAATGAAACAAATTAAAAAACGACCACGTTTTGAAGAT
GATACCAATATTCCTAAAAAATACCGCACCACTTGGAGCGATTATAAACACAGTGGATATACTCGTGGACATACGGCTTC
AAATGCTTCATTTCGTTTTAGTAAAGCTGCTCAAAATTCAGTTTTTTTAATGAGTAATATGACTCCACAAAATGAGCAAA
TTAATGCTAAAATTTGGAATGAAATTGAACAAAGAGAAAGAGAATTGGCTTTAAAATTTCAAAGTGTAGAAGTTTTAAAT
CTTGTTCTTTATGATAAAAATCCAAAACGAATAAAAAATAACATTGCAATACCTAGTTTTTATGTTAAAATCATCCAAAC
TCCAAAATTTAAAGAATGTTATCAGGTTCCAAATCACGAAGTTGTTGATGAAAAAATTAATCATTATAAAATTTCTTGTG
AGCAGTTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(26-190)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

69.118

94.444

0.653
  CJE0566 Campylobacter jejuni RM1221

67.647

94.444

0.639